Protein–RNA interactions for Protein: O43405

COCH, Cochlin, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COCHO43405 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COCHO43405 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COCHO43405 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.7■□□□□ 0.26
COCHO43405 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
COCHO43405 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
COCHO43405 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
COCHO43405 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COCHO43405 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
COCHO43405 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.69■□□□□ 0.26
COCHO43405 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
COCHO43405 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
COCHO43405 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
COCHO43405 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.69■□□□□ 0.26
COCHO43405 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
COCHO43405 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.69■□□□□ 0.26
COCHO43405 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.69■□□□□ 0.26
COCHO43405 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COCHO43405 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
COCHO43405 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
COCHO43405 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
COCHO43405 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
COCHO43405 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
COCHO43405 SPDYE19P-201ENST00000338590 713 ntBASIC16.69■□□□□ 0.26
COCHO43405 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC16.69■□□□□ 0.26
COCHO43405 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.69■□□□□ 0.26
COCHO43405 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.69■□□□□ 0.26
COCHO43405 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC16.69■□□□□ 0.26
COCHO43405 AC025048.3-201ENST00000590609 569 ntBASIC16.69■□□□□ 0.26
COCHO43405 AC005702.4-201ENST00000618393 416 ntBASIC16.69■□□□□ 0.26
COCHO43405 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.69■□□□□ 0.26
COCHO43405 AC006449.6-201ENST00000612330 2296 ntBASIC16.69■□□□□ 0.26
COCHO43405 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
COCHO43405 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COCHO43405 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.69■□□□□ 0.26
COCHO43405 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COCHO43405 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.69■□□□□ 0.26
COCHO43405 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COCHO43405 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.69■□□□□ 0.26
COCHO43405 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.69■□□□□ 0.26
COCHO43405 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
COCHO43405 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.69■□□□□ 0.26
COCHO43405 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.69■□□□□ 0.26
COCHO43405 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC16.69■□□□□ 0.26
COCHO43405 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.69■□□□□ 0.26
COCHO43405 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COCHO43405 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
COCHO43405 BNIP3P1-202ENST00000550043 1585 ntBASIC16.68■□□□□ 0.26
COCHO43405 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COCHO43405 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
COCHO43405 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COCHO43405 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
COCHO43405 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COCHO43405 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.68■□□□□ 0.26
COCHO43405 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COCHO43405 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COCHO43405 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COCHO43405 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COCHO43405 GSAP-205ENST00000430584 600 ntTSL 5 BASIC16.68■□□□□ 0.26
COCHO43405 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COCHO43405 EEF1DP4-201ENST00000446006 880 ntBASIC16.68■□□□□ 0.26
COCHO43405 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.68■□□□□ 0.26
COCHO43405 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
COCHO43405 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.68■□□□□ 0.26
COCHO43405 API5-211ENST00000534695 560 ntTSL 5 BASIC16.68■□□□□ 0.26
COCHO43405 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16.68■□□□□ 0.26
COCHO43405 AC005225.4-201ENST00000557330 545 ntBASIC16.68■□□□□ 0.26
COCHO43405 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC16.68■□□□□ 0.26
COCHO43405 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.68■□□□□ 0.26
COCHO43405 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.68■□□□□ 0.26
COCHO43405 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
COCHO43405 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
COCHO43405 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.68■□□□□ 0.26
COCHO43405 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
COCHO43405 SRD5A3P1-201ENST00000603021 949 ntBASIC16.68■□□□□ 0.26
COCHO43405 AC012645.4-201ENST00000610691 1061 ntBASIC16.68■□□□□ 0.26
COCHO43405 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16.68■□□□□ 0.26
COCHO43405 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.68■□□□□ 0.26
COCHO43405 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.68■□□□□ 0.26
COCHO43405 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
COCHO43405 AC025048.6-201ENST00000634326 1161 ntBASIC16.68■□□□□ 0.26
COCHO43405 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.68■□□□□ 0.26
COCHO43405 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COCHO43405 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
COCHO43405 KRT8P37-201ENST00000451609 1420 ntBASIC16.68■□□□□ 0.26
COCHO43405 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COCHO43405 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COCHO43405 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
COCHO43405 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COCHO43405 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.68■□□□□ 0.26
COCHO43405 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
COCHO43405 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COCHO43405 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
COCHO43405 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COCHO43405 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
COCHO43405 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
COCHO43405 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
COCHO43405 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
COCHO43405 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COCHO43405 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
COCHO43405 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms