Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TNRC18O15417 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC17.14■□□□□ 0.33
TNRC18O15417 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC17.14■□□□□ 0.33
TNRC18O15417 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TNRC18O15417 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TNRC18O15417 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.14■□□□□ 0.33
TNRC18O15417 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TNRC18O15417 AL157791.1-201ENST00000553667 1699 ntBASIC17.14■□□□□ 0.33
TNRC18O15417 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
TNRC18O15417 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TNRC18O15417 NHP2-202ENST00000314397 599 ntTSL 2 BASIC17.14■□□□□ 0.33
TNRC18O15417 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TNRC18O15417 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC17.14■□□□□ 0.33
TNRC18O15417 ATP5J-202ENST00000400087 826 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
TNRC18O15417 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC17.14■□□□□ 0.33
TNRC18O15417 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC17.14■□□□□ 0.33
TNRC18O15417 AP001002.3-201ENST00000623482 206 ntBASIC17.14■□□□□ 0.33
TNRC18O15417 AC002472.4-201ENST00000641915 272 ntBASIC17.14■□□□□ 0.33
TNRC18O15417 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TNRC18O15417 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TNRC18O15417 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.14■□□□□ 0.33
TNRC18O15417 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TNRC18O15417 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TNRC18O15417 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC17.14■□□□□ 0.33
TNRC18O15417 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
TNRC18O15417 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
TNRC18O15417 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
TNRC18O15417 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TNRC18O15417 GTF2I-203ENST00000443166 979 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TNRC18O15417 RNMTL1P1-201ENST00000454103 560 ntBASIC17.13■□□□□ 0.33
TNRC18O15417 AP001582.1-201ENST00000525856 295 ntBASIC17.13■□□□□ 0.33
TNRC18O15417 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC17.13■□□□□ 0.33
TNRC18O15417 AC007656.1-201ENST00000552238 573 ntTSL 4 BASIC17.13■□□□□ 0.33
TNRC18O15417 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC17.13■□□□□ 0.33
TNRC18O15417 MEG3_2.1-201ENST00000611456 105 ntBASIC17.13■□□□□ 0.33
TNRC18O15417 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TNRC18O15417 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TNRC18O15417 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.13■□□□□ 0.33
TNRC18O15417 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TNRC18O15417 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TNRC18O15417 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC17.13■□□□□ 0.33
TNRC18O15417 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TNRC18O15417 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TNRC18O15417 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TNRC18O15417 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
TNRC18O15417 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TNRC18O15417 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC17.13■□□□□ 0.33
TNRC18O15417 HHLA3-202ENST00000361764 692 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
TNRC18O15417 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC17.13■□□□□ 0.33
TNRC18O15417 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC17.13■□□□□ 0.33
TNRC18O15417 LYPLA2P1-203ENST00000447689 696 ntBASIC17.13■□□□□ 0.33
TNRC18O15417 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC17.13■□□□□ 0.33
TNRC18O15417 AL139339.2-201ENST00000608063 657 ntBASIC17.13■□□□□ 0.33
TNRC18O15417 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TNRC18O15417 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TNRC18O15417 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TNRC18O15417 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TNRC18O15417 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TNRC18O15417 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TNRC18O15417 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TNRC18O15417 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TNRC18O15417 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TNRC18O15417 AP000356.3-201ENST00000382243 753 ntBASIC17.13■□□□□ 0.33
TNRC18O15417 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.13■□□□□ 0.33
TNRC18O15417 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC17.13■□□□□ 0.33
TNRC18O15417 AC100850.1-201ENST00000506768 649 ntBASIC17.13■□□□□ 0.33
TNRC18O15417 EVX1-AS-203ENST00000519218 554 ntTSL 4 BASIC17.13■□□□□ 0.33
TNRC18O15417 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC17.13■□□□□ 0.33
TNRC18O15417 STUB1-204ENST00000564370 875 ntTSL 2 BASIC17.13■□□□□ 0.33
TNRC18O15417 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TNRC18O15417 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TNRC18O15417 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.12■□□□□ 0.33
TNRC18O15417 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.12■□□□□ 0.33
TNRC18O15417 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TNRC18O15417 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.12■□□□□ 0.33
TNRC18O15417 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.12■□□□□ 0.33
TNRC18O15417 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TNRC18O15417 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TNRC18O15417 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
TNRC18O15417 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC17.12■□□□□ 0.33
TNRC18O15417 PGGT1BP2-201ENST00000398621 1028 ntBASIC17.12■□□□□ 0.33
TNRC18O15417 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC17.12■□□□□ 0.33
TNRC18O15417 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TNRC18O15417 NAT9-211ENST00000580632 799 ntTSL 3 BASIC17.12■□□□□ 0.33
TNRC18O15417 RN7SL163P-201ENST00000583100 276 ntBASIC17.12■□□□□ 0.33
TNRC18O15417 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TNRC18O15417 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
TNRC18O15417 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TNRC18O15417 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TNRC18O15417 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TNRC18O15417 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TNRC18O15417 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TNRC18O15417 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.12■□□□□ 0.33
TNRC18O15417 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TNRC18O15417 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
TNRC18O15417 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TNRC18O15417 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TNRC18O15417 AC104073.2-201ENST00000453737 312 ntBASIC17.12■□□□□ 0.33
TNRC18O15417 AC021723.1-201ENST00000486306 515 ntBASIC17.12■□□□□ 0.33
TNRC18O15417 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms