Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
LINC01546A6NGU7 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC01546A6NGU7 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC01546A6NGU7 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
LINC01546A6NGU7 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
LINC01546A6NGU7 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
LINC01546A6NGU7 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
LINC01546A6NGU7 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
LINC01546A6NGU7 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
LINC01546A6NGU7 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
LINC01546A6NGU7 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
LINC01546A6NGU7 CICP14-201ENST00000629111 2732 ntBASIC11.46□□□□□ -0.57
LINC01546A6NGU7 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
LINC01546A6NGU7 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
LINC01546A6NGU7 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC11.46□□□□□ -0.57
LINC01546A6NGU7 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
LINC01546A6NGU7 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
LINC01546A6NGU7 STRN-202ENST00000379213 2254 ntTSL 5 BASIC11.46□□□□□ -0.57
LINC01546A6NGU7 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC11.46□□□□□ -0.57
LINC01546A6NGU7 RELA-227ENST00000615805 2236 ntTSL 5 BASIC11.46□□□□□ -0.57
LINC01546A6NGU7 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
LINC01546A6NGU7 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
LINC01546A6NGU7 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
LINC01546A6NGU7 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
LINC01546A6NGU7 AC112907.2-201ENST00000448639 330 ntBASIC11.46□□□□□ -0.57
LINC01546A6NGU7 KRT18P38-201ENST00000449496 1282 ntBASIC11.46□□□□□ -0.57
LINC01546A6NGU7 HOMER2P1-201ENST00000455653 964 ntBASIC11.46□□□□□ -0.57
LINC01546A6NGU7 AC091607.1-201ENST00000490318 1060 ntBASIC11.46□□□□□ -0.57
LINC01546A6NGU7 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
LINC01546A6NGU7 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC11.46□□□□□ -0.57
LINC01546A6NGU7 AC005412.3-201ENST00000580309 715 ntBASIC11.46□□□□□ -0.57
LINC01546A6NGU7 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC11.46□□□□□ -0.57
LINC01546A6NGU7 AL365330.1-201ENST00000607459 531 ntBASIC11.46□□□□□ -0.57
LINC01546A6NGU7 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC11.46□□□□□ -0.57
LINC01546A6NGU7 BSG-214ENST00000614867 960 ntTSL 3 BASIC11.46□□□□□ -0.57
LINC01546A6NGU7 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
LINC01546A6NGU7 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
LINC01546A6NGU7 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
LINC01546A6NGU7 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC11.46□□□□□ -0.57
LINC01546A6NGU7 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
LINC01546A6NGU7 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
LINC01546A6NGU7 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
LINC01546A6NGU7 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
LINC01546A6NGU7 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.58
LINC01546A6NGU7 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
LINC01546A6NGU7 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC11.46□□□□□ -0.58
LINC01546A6NGU7 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
LINC01546A6NGU7 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC11.46□□□□□ -0.58
LINC01546A6NGU7 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC11.46□□□□□ -0.58
LINC01546A6NGU7 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC11.46□□□□□ -0.58
LINC01546A6NGU7 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.58
LINC01546A6NGU7 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.58
LINC01546A6NGU7 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
LINC01546A6NGU7 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
LINC01546A6NGU7 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC11.45□□□□□ -0.58
LINC01546A6NGU7 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC01546A6NGU7 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC11.45□□□□□ -0.58
LINC01546A6NGU7 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC01546A6NGU7 AC023024.2-201ENST00000623561 1993 ntBASIC11.45□□□□□ -0.58
LINC01546A6NGU7 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC01546A6NGU7 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC01546A6NGU7 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
LINC01546A6NGU7 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC01546A6NGU7 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
LINC01546A6NGU7 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
LINC01546A6NGU7 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
LINC01546A6NGU7 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC01546A6NGU7 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC01546A6NGU7 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC01546A6NGU7 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC01546A6NGU7 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC01546A6NGU7 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC11.45□□□□□ -0.58
LINC01546A6NGU7 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
LINC01546A6NGU7 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC11.45□□□□□ -0.58
LINC01546A6NGU7 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC01546A6NGU7 YBX1P2-201ENST00000489612 999 ntBASIC11.45□□□□□ -0.58
LINC01546A6NGU7 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC11.45□□□□□ -0.58
LINC01546A6NGU7 ABR-204ENST00000543210 1049 ntTSL 2 BASIC11.45□□□□□ -0.58
LINC01546A6NGU7 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC11.45□□□□□ -0.58
LINC01546A6NGU7 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC11.45□□□□□ -0.58
LINC01546A6NGU7 ABR-217ENST00000572441 563 ntTSL 4 BASIC11.45□□□□□ -0.58
LINC01546A6NGU7 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
LINC01546A6NGU7 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC11.45□□□□□ -0.58
LINC01546A6NGU7 DFFB-212ENST00000625756 649 ntTSL 5 BASIC11.45□□□□□ -0.58
LINC01546A6NGU7 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC11.45□□□□□ -0.58
LINC01546A6NGU7 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC11.45□□□□□ -0.58
LINC01546A6NGU7 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC01546A6NGU7 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC01546A6NGU7 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC01546A6NGU7 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC01546A6NGU7 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC11.45□□□□□ -0.58
LINC01546A6NGU7 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC01546A6NGU7 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
LINC01546A6NGU7 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC01546A6NGU7 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC01546A6NGU7 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC01546A6NGU7 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC01546A6NGU7 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC01546A6NGU7 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
LINC01546A6NGU7 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC11.45□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms