Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.15■□□□□ 0.18
TBC1D3FA6NER0 AD000864.1-201ENST00000624076 2295 ntBASIC16.15■□□□□ 0.18
TBC1D3FA6NER0 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TBC1D3FA6NER0 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.18
TBC1D3FA6NER0 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
TBC1D3FA6NER0 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
TBC1D3FA6NER0 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
TBC1D3FA6NER0 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
TBC1D3FA6NER0 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TBC1D3FA6NER0 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TBC1D3FA6NER0 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.14■□□□□ 0.17
TBC1D3FA6NER0 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TBC1D3FA6NER0 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
TBC1D3FA6NER0 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TBC1D3FA6NER0 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
TBC1D3FA6NER0 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TBC1D3FA6NER0 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
TBC1D3FA6NER0 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.14■□□□□ 0.17
TBC1D3FA6NER0 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.14■□□□□ 0.17
TBC1D3FA6NER0 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TBC1D3FA6NER0 SPDYE19P-201ENST00000338590 713 ntBASIC16.14■□□□□ 0.17
TBC1D3FA6NER0 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
TBC1D3FA6NER0 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TBC1D3FA6NER0 DOC2GP-202ENST00000514950 1163 ntBASIC16.14■□□□□ 0.17
TBC1D3FA6NER0 SDHAP3-202ENST00000515467 728 ntBASIC16.14■□□□□ 0.17
TBC1D3FA6NER0 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.14■□□□□ 0.17
TBC1D3FA6NER0 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC16.14■□□□□ 0.17
TBC1D3FA6NER0 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.14■□□□□ 0.17
TBC1D3FA6NER0 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TBC1D3FA6NER0 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC16.14■□□□□ 0.17
TBC1D3FA6NER0 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TBC1D3FA6NER0 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.14■□□□□ 0.17
TBC1D3FA6NER0 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
TBC1D3FA6NER0 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TBC1D3FA6NER0 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TBC1D3FA6NER0 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
TBC1D3FA6NER0 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.14■□□□□ 0.17
TBC1D3FA6NER0 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TBC1D3FA6NER0 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.14■□□□□ 0.17
TBC1D3FA6NER0 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TBC1D3FA6NER0 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
TBC1D3FA6NER0 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
TBC1D3FA6NER0 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.14■□□□□ 0.17
TBC1D3FA6NER0 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
TBC1D3FA6NER0 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TBC1D3FA6NER0 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.13■□□□□ 0.17
TBC1D3FA6NER0 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.13■□□□□ 0.17
TBC1D3FA6NER0 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
TBC1D3FA6NER0 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TBC1D3FA6NER0 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TBC1D3FA6NER0 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TBC1D3FA6NER0 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TBC1D3FA6NER0 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.13■□□□□ 0.17
TBC1D3FA6NER0 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TBC1D3FA6NER0 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TBC1D3FA6NER0 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TBC1D3FA6NER0 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TBC1D3FA6NER0 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.13■□□□□ 0.17
TBC1D3FA6NER0 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
TBC1D3FA6NER0 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TBC1D3FA6NER0 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TBC1D3FA6NER0 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TBC1D3FA6NER0 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TBC1D3FA6NER0 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TBC1D3FA6NER0 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
TBC1D3FA6NER0 POU5F1P6-201ENST00000466990 990 ntBASIC16.13■□□□□ 0.17
TBC1D3FA6NER0 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC16.13■□□□□ 0.17
TBC1D3FA6NER0 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.13■□□□□ 0.17
TBC1D3FA6NER0 TP53TG3HP-202ENST00000569755 579 ntBASIC16.13■□□□□ 0.17
TBC1D3FA6NER0 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.13■□□□□ 0.17
TBC1D3FA6NER0 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC16.13■□□□□ 0.17
TBC1D3FA6NER0 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TBC1D3FA6NER0 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
TBC1D3FA6NER0 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TBC1D3FA6NER0 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TBC1D3FA6NER0 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
TBC1D3FA6NER0 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TBC1D3FA6NER0 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.13■□□□□ 0.17
TBC1D3FA6NER0 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TBC1D3FA6NER0 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TBC1D3FA6NER0 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TBC1D3FA6NER0 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TBC1D3FA6NER0 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TBC1D3FA6NER0 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TBC1D3FA6NER0 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TBC1D3FA6NER0 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.12■□□□□ 0.17
TBC1D3FA6NER0 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TBC1D3FA6NER0 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TBC1D3FA6NER0 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.12■□□□□ 0.17
TBC1D3FA6NER0 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
TBC1D3FA6NER0 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.12■□□□□ 0.17
TBC1D3FA6NER0 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
TBC1D3FA6NER0 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
TBC1D3FA6NER0 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.12■□□□□ 0.17
TBC1D3FA6NER0 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TBC1D3FA6NER0 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.12■□□□□ 0.17
TBC1D3FA6NER0 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TBC1D3FA6NER0 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
TBC1D3FA6NER0 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TBC1D3FA6NER0 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms