Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MBD3L3A6NE82 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MBD3L3A6NE82 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
MBD3L3A6NE82 AGGF1P2-201ENST00000426656 2106 ntBASIC14.18□□□□□ -0.14
MBD3L3A6NE82 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.18□□□□□ -0.14
MBD3L3A6NE82 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MBD3L3A6NE82 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
MBD3L3A6NE82 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MBD3L3A6NE82 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MBD3L3A6NE82 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.18□□□□□ -0.14
MBD3L3A6NE82 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.18□□□□□ -0.14
MBD3L3A6NE82 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
MBD3L3A6NE82 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
MBD3L3A6NE82 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MBD3L3A6NE82 AC092171.3-201ENST00000610122 2651 ntBASIC14.18□□□□□ -0.14
MBD3L3A6NE82 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MBD3L3A6NE82 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MBD3L3A6NE82 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC14.17□□□□□ -0.14
MBD3L3A6NE82 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
MBD3L3A6NE82 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC14.17□□□□□ -0.14
MBD3L3A6NE82 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MBD3L3A6NE82 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
MBD3L3A6NE82 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.17□□□□□ -0.14
MBD3L3A6NE82 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
MBD3L3A6NE82 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.17□□□□□ -0.14
MBD3L3A6NE82 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MBD3L3A6NE82 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MBD3L3A6NE82 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MBD3L3A6NE82 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
MBD3L3A6NE82 RN7SL752P-201ENST00000463779 287 ntBASIC14.17□□□□□ -0.14
MBD3L3A6NE82 NAA50-208ENST00000497255 789 ntTSL 5 BASIC14.17□□□□□ -0.14
MBD3L3A6NE82 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.17□□□□□ -0.14
MBD3L3A6NE82 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
MBD3L3A6NE82 AC123567.1-201ENST00000548294 1261 ntBASIC14.17□□□□□ -0.14
MBD3L3A6NE82 POLE2-203ENST00000553805 496 ntTSL 2 BASIC14.17□□□□□ -0.14
MBD3L3A6NE82 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.17□□□□□ -0.14
MBD3L3A6NE82 RARRES2P5-201ENST00000564013 466 ntBASIC14.17□□□□□ -0.14
MBD3L3A6NE82 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC14.17□□□□□ -0.14
MBD3L3A6NE82 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
MBD3L3A6NE82 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.17□□□□□ -0.14
MBD3L3A6NE82 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
MBD3L3A6NE82 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.17□□□□□ -0.14
MBD3L3A6NE82 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MBD3L3A6NE82 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
MBD3L3A6NE82 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
MBD3L3A6NE82 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MBD3L3A6NE82 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
MBD3L3A6NE82 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
MBD3L3A6NE82 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MBD3L3A6NE82 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
MBD3L3A6NE82 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
MBD3L3A6NE82 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
MBD3L3A6NE82 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
MBD3L3A6NE82 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
MBD3L3A6NE82 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
MBD3L3A6NE82 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
MBD3L3A6NE82 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
MBD3L3A6NE82 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
MBD3L3A6NE82 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
MBD3L3A6NE82 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
MBD3L3A6NE82 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
MBD3L3A6NE82 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
MBD3L3A6NE82 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
MBD3L3A6NE82 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.16□□□□□ -0.14
MBD3L3A6NE82 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
MBD3L3A6NE82 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
MBD3L3A6NE82 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.16□□□□□ -0.14
MBD3L3A6NE82 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
MBD3L3A6NE82 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
MBD3L3A6NE82 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
MBD3L3A6NE82 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
MBD3L3A6NE82 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.16□□□□□ -0.14
MBD3L3A6NE82 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
MBD3L3A6NE82 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC14.16□□□□□ -0.14
MBD3L3A6NE82 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
MBD3L3A6NE82 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC14.16□□□□□ -0.14
MBD3L3A6NE82 MYCLP2-201ENST00000449268 967 ntBASIC14.16□□□□□ -0.14
MBD3L3A6NE82 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC14.16□□□□□ -0.14
MBD3L3A6NE82 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
MBD3L3A6NE82 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.16□□□□□ -0.14
MBD3L3A6NE82 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.16□□□□□ -0.14
MBD3L3A6NE82 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
MBD3L3A6NE82 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC14.16□□□□□ -0.14
MBD3L3A6NE82 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.16□□□□□ -0.14
MBD3L3A6NE82 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
MBD3L3A6NE82 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
MBD3L3A6NE82 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC14.16□□□□□ -0.14
MBD3L3A6NE82 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
MBD3L3A6NE82 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC14.16□□□□□ -0.14
MBD3L3A6NE82 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.16□□□□□ -0.14
MBD3L3A6NE82 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.16□□□□□ -0.14
MBD3L3A6NE82 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
MBD3L3A6NE82 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
MBD3L3A6NE82 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.16□□□□□ -0.14
MBD3L3A6NE82 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
MBD3L3A6NE82 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
MBD3L3A6NE82 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
MBD3L3A6NE82 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
MBD3L3A6NE82 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
MBD3L3A6NE82 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms