Protein–RNA interactions for Protein: A1L4H1

SSC5D, Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D, humanhuman

Predictions only

Length 1,573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5DA1L4H1 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SSC5DA1L4H1 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
SSC5DA1L4H1 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
SSC5DA1L4H1 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC18.6■□□□□ 0.57
SSC5DA1L4H1 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
SSC5DA1L4H1 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC18.6■□□□□ 0.57
SSC5DA1L4H1 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SSC5DA1L4H1 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SSC5DA1L4H1 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
SSC5DA1L4H1 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SSC5DA1L4H1 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SSC5DA1L4H1 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC18.6■□□□□ 0.57
SSC5DA1L4H1 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
SSC5DA1L4H1 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
SSC5DA1L4H1 AC007969.1-201ENST00000433675 447 ntBASIC18.59■□□□□ 0.57
SSC5DA1L4H1 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC18.59■□□□□ 0.57
SSC5DA1L4H1 AC015910.1-201ENST00000579400 975 ntBASIC18.59■□□□□ 0.57
SSC5DA1L4H1 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SSC5DA1L4H1 LARP4-220ENST00000615080 856 ntTSL 5 BASIC18.59■□□□□ 0.57
SSC5DA1L4H1 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC18.59■□□□□ 0.57
SSC5DA1L4H1 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
SSC5DA1L4H1 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
SSC5DA1L4H1 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC18.59■□□□□ 0.57
SSC5DA1L4H1 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SSC5DA1L4H1 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SSC5DA1L4H1 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SSC5DA1L4H1 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SSC5DA1L4H1 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SSC5DA1L4H1 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
SSC5DA1L4H1 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC18.59■□□□□ 0.57
SSC5DA1L4H1 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC18.59■□□□□ 0.57
SSC5DA1L4H1 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SSC5DA1L4H1 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SSC5DA1L4H1 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
SSC5DA1L4H1 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SSC5DA1L4H1 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
SSC5DA1L4H1 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SSC5DA1L4H1 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SSC5DA1L4H1 IGHJ2P-201ENST00000454480 60 ntBASIC18.59■□□□□ 0.57
SSC5DA1L4H1 KRT8P13-201ENST00000463294 1010 ntBASIC18.59■□□□□ 0.57
SSC5DA1L4H1 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SSC5DA1L4H1 PFN2-215ENST00000497148 743 ntTSL 4 BASIC18.59■□□□□ 0.57
SSC5DA1L4H1 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC18.59■□□□□ 0.57
SSC5DA1L4H1 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SSC5DA1L4H1 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC18.59■□□□□ 0.57
SSC5DA1L4H1 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SSC5DA1L4H1 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC18.59■□□□□ 0.57
SSC5DA1L4H1 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
SSC5DA1L4H1 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SSC5DA1L4H1 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC18.59■□□□□ 0.57
SSC5DA1L4H1 AL607033.1-201ENST00000623900 1599 ntBASIC18.59■□□□□ 0.57
SSC5DA1L4H1 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC18.58■□□□□ 0.57
SSC5DA1L4H1 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC18.58■□□□□ 0.57
SSC5DA1L4H1 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
SSC5DA1L4H1 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
SSC5DA1L4H1 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SSC5DA1L4H1 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SSC5DA1L4H1 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SSC5DA1L4H1 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SSC5DA1L4H1 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SSC5DA1L4H1 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
SSC5DA1L4H1 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC18.58■□□□□ 0.56
SSC5DA1L4H1 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SSC5DA1L4H1 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SSC5DA1L4H1 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SSC5DA1L4H1 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
SSC5DA1L4H1 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SSC5DA1L4H1 DRD5P1-201ENST00000456605 1438 ntBASIC18.58■□□□□ 0.56
SSC5DA1L4H1 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SSC5DA1L4H1 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SSC5DA1L4H1 IFT20-206ENST00000578122 834 ntTSL 2 BASIC18.58■□□□□ 0.56
SSC5DA1L4H1 IFT20-208ENST00000578985 831 ntTSL 3 BASIC18.58■□□□□ 0.56
SSC5DA1L4H1 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC18.58■□□□□ 0.56
SSC5DA1L4H1 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC18.58■□□□□ 0.56
SSC5DA1L4H1 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
SSC5DA1L4H1 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC18.58■□□□□ 0.56
SSC5DA1L4H1 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SSC5DA1L4H1 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
SSC5DA1L4H1 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SSC5DA1L4H1 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SSC5DA1L4H1 REXO1L1P-202ENST00000608646 1974 ntBASIC18.57■□□□□ 0.56
SSC5DA1L4H1 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
SSC5DA1L4H1 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC18.57■□□□□ 0.56
SSC5DA1L4H1 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SSC5DA1L4H1 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC18.57■□□□□ 0.56
SSC5DA1L4H1 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SSC5DA1L4H1 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SSC5DA1L4H1 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
SSC5DA1L4H1 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC18.57■□□□□ 0.56
SSC5DA1L4H1 PHKG1P2-201ENST00000457537 863 ntBASIC18.57■□□□□ 0.56
SSC5DA1L4H1 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC18.57■□□□□ 0.56
SSC5DA1L4H1 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC18.57■□□□□ 0.56
SSC5DA1L4H1 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC18.57■□□□□ 0.56
SSC5DA1L4H1 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SSC5DA1L4H1 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC18.57■□□□□ 0.56
SSC5DA1L4H1 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
SSC5DA1L4H1 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SSC5DA1L4H1 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
SSC5DA1L4H1 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SSC5DA1L4H1 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms