Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.23■□□□□ 0.03
PCDHGA9Q9Y5G4 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
PCDHGA9Q9Y5G4 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHGA9Q9Y5G4 MEIS3P1-201ENST00000495167 958 ntBASIC15.23■□□□□ 0.03
PCDHGA9Q9Y5G4 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.23■□□□□ 0.03
PCDHGA9Q9Y5G4 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC15.23■□□□□ 0.03
PCDHGA9Q9Y5G4 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHGA9Q9Y5G4 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC15.23■□□□□ 0.03
PCDHGA9Q9Y5G4 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC15.23■□□□□ 0.03
PCDHGA9Q9Y5G4 TP53TG3HP-202ENST00000569755 579 ntBASIC15.23■□□□□ 0.03
PCDHGA9Q9Y5G4 PRR29-204ENST00000577953 565 ntTSL 4 BASIC15.23■□□□□ 0.03
PCDHGA9Q9Y5G4 SSH2-210ENST00000582084 560 ntTSL 3 BASIC15.23■□□□□ 0.03
PCDHGA9Q9Y5G4 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.23■□□□□ 0.03
PCDHGA9Q9Y5G4 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC15.23■□□□□ 0.03
PCDHGA9Q9Y5G4 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.23■□□□□ 0.03
PCDHGA9Q9Y5G4 AL008721.1-201ENST00000609964 604 ntBASIC15.23■□□□□ 0.03
PCDHGA9Q9Y5G4 TEX28P1-201ENST00000613479 1221 ntBASIC15.23■□□□□ 0.03
PCDHGA9Q9Y5G4 SPTSSB-204ENST00000617024 1292 ntBASIC15.23■□□□□ 0.03
PCDHGA9Q9Y5G4 TEX28P2-201ENST00000617764 1221 ntBASIC15.23■□□□□ 0.03
PCDHGA9Q9Y5G4 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.23■□□□□ 0.03
PCDHGA9Q9Y5G4 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.23■□□□□ 0.03
PCDHGA9Q9Y5G4 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.23■□□□□ 0.03
PCDHGA9Q9Y5G4 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHGA9Q9Y5G4 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.23■□□□□ 0.03
PCDHGA9Q9Y5G4 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHGA9Q9Y5G4 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHGA9Q9Y5G4 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHGA9Q9Y5G4 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.23■□□□□ 0.03
PCDHGA9Q9Y5G4 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHGA9Q9Y5G4 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
PCDHGA9Q9Y5G4 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.23■□□□□ 0.03
PCDHGA9Q9Y5G4 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHGA9Q9Y5G4 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHGA9Q9Y5G4 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.23■□□□□ 0.03
PCDHGA9Q9Y5G4 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHGA9Q9Y5G4 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.23■□□□□ 0.03
PCDHGA9Q9Y5G4 AC006449.5-201ENST00000610658 2098 ntBASIC15.23■□□□□ 0.03
PCDHGA9Q9Y5G4 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHGA9Q9Y5G4 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC15.23■□□□□ 0.03
PCDHGA9Q9Y5G4 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHGA9Q9Y5G4 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
PCDHGA9Q9Y5G4 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGA9Q9Y5G4 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGA9Q9Y5G4 FOXO1B-201ENST00000504678 1527 ntBASIC15.22■□□□□ 0.03
PCDHGA9Q9Y5G4 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGA9Q9Y5G4 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGA9Q9Y5G4 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGA9Q9Y5G4 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.22■□□□□ 0.03
PCDHGA9Q9Y5G4 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGA9Q9Y5G4 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGA9Q9Y5G4 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
PCDHGA9Q9Y5G4 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGA9Q9Y5G4 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
PCDHGA9Q9Y5G4 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGA9Q9Y5G4 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC15.22■□□□□ 0.03
PCDHGA9Q9Y5G4 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC15.22■□□□□ 0.03
PCDHGA9Q9Y5G4 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC15.22■□□□□ 0.03
PCDHGA9Q9Y5G4 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGA9Q9Y5G4 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGA9Q9Y5G4 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC15.22■□□□□ 0.03
PCDHGA9Q9Y5G4 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGA9Q9Y5G4 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC15.22■□□□□ 0.03
PCDHGA9Q9Y5G4 AL353779.1-201ENST00000434793 351 ntBASIC15.22■□□□□ 0.03
PCDHGA9Q9Y5G4 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC15.22■□□□□ 0.03
PCDHGA9Q9Y5G4 NAA50-208ENST00000497255 789 ntTSL 5 BASIC15.22■□□□□ 0.03
PCDHGA9Q9Y5G4 CDK4-206ENST00000549606 558 ntTSL 2 BASIC15.22■□□□□ 0.03
PCDHGA9Q9Y5G4 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC15.22■□□□□ 0.03
PCDHGA9Q9Y5G4 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGA9Q9Y5G4 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGA9Q9Y5G4 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGA9Q9Y5G4 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
PCDHGA9Q9Y5G4 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGA9Q9Y5G4 LINC02012-201ENST00000608206 1725 ntBASIC15.22■□□□□ 0.03
PCDHGA9Q9Y5G4 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC15.22■□□□□ 0.03
PCDHGA9Q9Y5G4 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGA9Q9Y5G4 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGA9Q9Y5G4 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGA9Q9Y5G4 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGA9Q9Y5G4 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
PCDHGA9Q9Y5G4 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGA9Q9Y5G4 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGA9Q9Y5G4 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.22■□□□□ 0.03
PCDHGA9Q9Y5G4 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGA9Q9Y5G4 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGA9Q9Y5G4 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGA9Q9Y5G4 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.22■□□□□ 0.03
PCDHGA9Q9Y5G4 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.22■□□□□ 0.03
PCDHGA9Q9Y5G4 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
PCDHGA9Q9Y5G4 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
PCDHGA9Q9Y5G4 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGA9Q9Y5G4 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGA9Q9Y5G4 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.21■□□□□ 0.03
PCDHGA9Q9Y5G4 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGA9Q9Y5G4 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.21■□□□□ 0.03
PCDHGA9Q9Y5G4 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGA9Q9Y5G4 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGA9Q9Y5G4 RNF216P1-203ENST00000404404 2427 ntBASIC15.21■□□□□ 0.03
PCDHGA9Q9Y5G4 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.21■□□□□ 0.03
PCDHGA9Q9Y5G4 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.21■□□□□ 0.03
PCDHGA9Q9Y5G4 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms