Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00588Q9Y4M8 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00588Q9Y4M8 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
LINC00588Q9Y4M8 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
LINC00588Q9Y4M8 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
LINC00588Q9Y4M8 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
LINC00588Q9Y4M8 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00588Q9Y4M8 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
LINC00588Q9Y4M8 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
LINC00588Q9Y4M8 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
LINC00588Q9Y4M8 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC11.12□□□□□ -0.63
LINC00588Q9Y4M8 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00588Q9Y4M8 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00588Q9Y4M8 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00588Q9Y4M8 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00588Q9Y4M8 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC11.12□□□□□ -0.63
LINC00588Q9Y4M8 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00588Q9Y4M8 COX20P2-201ENST00000452636 358 ntBASIC11.12□□□□□ -0.63
LINC00588Q9Y4M8 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00588Q9Y4M8 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC11.12□□□□□ -0.63
LINC00588Q9Y4M8 YTHDF3-AS1-201ENST00000603538 718 ntBASIC11.12□□□□□ -0.63
LINC00588Q9Y4M8 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC11.12□□□□□ -0.63
LINC00588Q9Y4M8 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00588Q9Y4M8 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC11.12□□□□□ -0.63
LINC00588Q9Y4M8 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00588Q9Y4M8 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
LINC00588Q9Y4M8 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00588Q9Y4M8 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC11.12□□□□□ -0.63
LINC00588Q9Y4M8 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
LINC00588Q9Y4M8 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00588Q9Y4M8 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC11.12□□□□□ -0.63
LINC00588Q9Y4M8 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00588Q9Y4M8 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00588Q9Y4M8 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00588Q9Y4M8 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
LINC00588Q9Y4M8 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC11.11□□□□□ -0.63
LINC00588Q9Y4M8 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC00588Q9Y4M8 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC00588Q9Y4M8 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC00588Q9Y4M8 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC00588Q9Y4M8 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC11.11□□□□□ -0.63
LINC00588Q9Y4M8 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC11.11□□□□□ -0.63
LINC00588Q9Y4M8 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC11.11□□□□□ -0.63
LINC00588Q9Y4M8 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC00588Q9Y4M8 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC00588Q9Y4M8 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
LINC00588Q9Y4M8 IMPDH1P4-201ENST00000445028 1534 ntBASIC11.11□□□□□ -0.63
LINC00588Q9Y4M8 AL592424.1-201ENST00000563624 1536 ntBASIC11.11□□□□□ -0.63
LINC00588Q9Y4M8 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC11.11□□□□□ -0.63
LINC00588Q9Y4M8 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC11.11□□□□□ -0.63
LINC00588Q9Y4M8 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC00588Q9Y4M8 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC11.11□□□□□ -0.63
LINC00588Q9Y4M8 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
LINC00588Q9Y4M8 NF2-208ENST00000403435 2568 ntTSL 5 BASIC11.11□□□□□ -0.63
LINC00588Q9Y4M8 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC00588Q9Y4M8 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC00588Q9Y4M8 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC11.11□□□□□ -0.63
LINC00588Q9Y4M8 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC11.11□□□□□ -0.63
LINC00588Q9Y4M8 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
LINC00588Q9Y4M8 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC00588Q9Y4M8 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
LINC00588Q9Y4M8 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
LINC00588Q9Y4M8 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
LINC00588Q9Y4M8 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC11.11□□□□□ -0.63
LINC00588Q9Y4M8 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
LINC00588Q9Y4M8 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC11.11□□□□□ -0.63
LINC00588Q9Y4M8 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC11.11□□□□□ -0.63
LINC00588Q9Y4M8 AC009477.1-201ENST00000452936 217 ntBASIC11.11□□□□□ -0.63
LINC00588Q9Y4M8 SERBP1P3-201ENST00000459980 809 ntBASIC11.11□□□□□ -0.63
LINC00588Q9Y4M8 RN7SL618P-201ENST00000477850 296 ntBASIC11.11□□□□□ -0.63
LINC00588Q9Y4M8 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
LINC00588Q9Y4M8 SERBP1P5-201ENST00000510079 1181 ntBASIC11.11□□□□□ -0.63
LINC00588Q9Y4M8 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC11.11□□□□□ -0.63
LINC00588Q9Y4M8 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
LINC00588Q9Y4M8 STOM-203ENST00000538954 1257 ntTSL 5 BASIC11.11□□□□□ -0.63
LINC00588Q9Y4M8 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC11.11□□□□□ -0.63
LINC00588Q9Y4M8 AL844908.2-201ENST00000609461 460 ntBASIC11.11□□□□□ -0.63
LINC00588Q9Y4M8 AC009118.2-201ENST00000613275 655 ntBASIC11.11□□□□□ -0.63
LINC00588Q9Y4M8 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
LINC00588Q9Y4M8 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
LINC00588Q9Y4M8 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC11.11□□□□□ -0.63
LINC00588Q9Y4M8 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC00588Q9Y4M8 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC00588Q9Y4M8 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC00588Q9Y4M8 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC00588Q9Y4M8 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC00588Q9Y4M8 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
LINC00588Q9Y4M8 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC11.11□□□□□ -0.63
LINC00588Q9Y4M8 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC00588Q9Y4M8 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC11.11□□□□□ -0.63
LINC00588Q9Y4M8 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC00588Q9Y4M8 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC00588Q9Y4M8 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC00588Q9Y4M8 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC00588Q9Y4M8 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
LINC00588Q9Y4M8 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
LINC00588Q9Y4M8 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
LINC00588Q9Y4M8 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC11.11□□□□□ -0.63
LINC00588Q9Y4M8 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
LINC00588Q9Y4M8 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms