Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 NCF1C-201ENST00000438382 1427 ntBASIC18.74■□□□□ 0.59
R3HCC1Q9Y3T6 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.74■□□□□ 0.59
R3HCC1Q9Y3T6 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.74■□□□□ 0.59
R3HCC1Q9Y3T6 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
R3HCC1Q9Y3T6 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC18.74■□□□□ 0.59
R3HCC1Q9Y3T6 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
R3HCC1Q9Y3T6 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
R3HCC1Q9Y3T6 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
R3HCC1Q9Y3T6 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
R3HCC1Q9Y3T6 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
R3HCC1Q9Y3T6 AL603832.2-201ENST00000566195 2125 ntBASIC18.74■□□□□ 0.59
R3HCC1Q9Y3T6 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
R3HCC1Q9Y3T6 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
R3HCC1Q9Y3T6 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC18.74■□□□□ 0.59
R3HCC1Q9Y3T6 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
R3HCC1Q9Y3T6 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
R3HCC1Q9Y3T6 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC18.74■□□□□ 0.59
R3HCC1Q9Y3T6 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
R3HCC1Q9Y3T6 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC18.74■□□□□ 0.59
R3HCC1Q9Y3T6 GSN-203ENST00000373808 2664 ntTSL 2 BASIC18.74■□□□□ 0.59
R3HCC1Q9Y3T6 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC18.74■□□□□ 0.59
R3HCC1Q9Y3T6 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
R3HCC1Q9Y3T6 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.74■□□□□ 0.59
R3HCC1Q9Y3T6 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.74■□□□□ 0.59
R3HCC1Q9Y3T6 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
R3HCC1Q9Y3T6 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
R3HCC1Q9Y3T6 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
R3HCC1Q9Y3T6 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.74■□□□□ 0.59
R3HCC1Q9Y3T6 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.74■□□□□ 0.59
R3HCC1Q9Y3T6 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
R3HCC1Q9Y3T6 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
R3HCC1Q9Y3T6 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC18.74■□□□□ 0.59
R3HCC1Q9Y3T6 RPS2P1-201ENST00000434010 821 ntBASIC18.74■□□□□ 0.59
R3HCC1Q9Y3T6 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.74■□□□□ 0.59
R3HCC1Q9Y3T6 AC079776.4-201ENST00000511039 504 ntBASIC18.74■□□□□ 0.59
R3HCC1Q9Y3T6 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.74■□□□□ 0.59
R3HCC1Q9Y3T6 AP001005.1-201ENST00000571755 1248 ntBASIC18.74■□□□□ 0.59
R3HCC1Q9Y3T6 AL589182.2-201ENST00000619332 1049 ntBASIC18.74■□□□□ 0.59
R3HCC1Q9Y3T6 PGR-210ENST00000619228 3038 ntTSL 5 BASIC18.74■□□□□ 0.59
R3HCC1Q9Y3T6 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
R3HCC1Q9Y3T6 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
R3HCC1Q9Y3T6 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
R3HCC1Q9Y3T6 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC18.74■□□□□ 0.59
R3HCC1Q9Y3T6 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
R3HCC1Q9Y3T6 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC18.74■□□□□ 0.59
R3HCC1Q9Y3T6 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC18.74■□□□□ 0.59
R3HCC1Q9Y3T6 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
R3HCC1Q9Y3T6 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
R3HCC1Q9Y3T6 AC148477.5-201ENST00000625164 1645 ntBASIC18.74■□□□□ 0.59
R3HCC1Q9Y3T6 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
R3HCC1Q9Y3T6 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
R3HCC1Q9Y3T6 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
R3HCC1Q9Y3T6 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC18.74■□□□□ 0.59
R3HCC1Q9Y3T6 PPT1-215ENST00000641471 2368 ntBASIC18.74■□□□□ 0.59
R3HCC1Q9Y3T6 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
R3HCC1Q9Y3T6 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
R3HCC1Q9Y3T6 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
R3HCC1Q9Y3T6 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
R3HCC1Q9Y3T6 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
R3HCC1Q9Y3T6 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
R3HCC1Q9Y3T6 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.73■□□□□ 0.59
R3HCC1Q9Y3T6 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
R3HCC1Q9Y3T6 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
R3HCC1Q9Y3T6 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
R3HCC1Q9Y3T6 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
R3HCC1Q9Y3T6 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC18.73■□□□□ 0.59
R3HCC1Q9Y3T6 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
R3HCC1Q9Y3T6 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
R3HCC1Q9Y3T6 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.73■□□□□ 0.59
R3HCC1Q9Y3T6 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
R3HCC1Q9Y3T6 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
R3HCC1Q9Y3T6 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
R3HCC1Q9Y3T6 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
R3HCC1Q9Y3T6 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
R3HCC1Q9Y3T6 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
R3HCC1Q9Y3T6 LAGE3P1-201ENST00000425356 484 ntBASIC18.73■□□□□ 0.59
R3HCC1Q9Y3T6 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.73■□□□□ 0.59
R3HCC1Q9Y3T6 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
R3HCC1Q9Y3T6 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.73■□□□□ 0.59
R3HCC1Q9Y3T6 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.73■□□□□ 0.59
R3HCC1Q9Y3T6 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC18.73■□□□□ 0.59
R3HCC1Q9Y3T6 AC006557.2-201ENST00000592985 1240 ntBASIC18.73■□□□□ 0.59
R3HCC1Q9Y3T6 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC18.73■□□□□ 0.59
R3HCC1Q9Y3T6 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
R3HCC1Q9Y3T6 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
R3HCC1Q9Y3T6 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
R3HCC1Q9Y3T6 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
R3HCC1Q9Y3T6 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
R3HCC1Q9Y3T6 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
R3HCC1Q9Y3T6 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
R3HCC1Q9Y3T6 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
R3HCC1Q9Y3T6 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
R3HCC1Q9Y3T6 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC18.73■□□□□ 0.59
R3HCC1Q9Y3T6 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
R3HCC1Q9Y3T6 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC18.73■□□□□ 0.59
R3HCC1Q9Y3T6 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
R3HCC1Q9Y3T6 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC18.73■□□□□ 0.59
R3HCC1Q9Y3T6 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.73■□□□□ 0.59
R3HCC1Q9Y3T6 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
R3HCC1Q9Y3T6 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms