Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LRCH1Q9Y2L9 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
LRCH1Q9Y2L9 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRCH1Q9Y2L9 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC15.55■□□□□ 0.08
LRCH1Q9Y2L9 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRCH1Q9Y2L9 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRCH1Q9Y2L9 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC15.55■□□□□ 0.08
LRCH1Q9Y2L9 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
LRCH1Q9Y2L9 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LRCH1Q9Y2L9 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC15.54■□□□□ 0.08
LRCH1Q9Y2L9 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC15.54■□□□□ 0.08
LRCH1Q9Y2L9 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.54■□□□□ 0.08
LRCH1Q9Y2L9 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.54■□□□□ 0.08
LRCH1Q9Y2L9 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
LRCH1Q9Y2L9 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
LRCH1Q9Y2L9 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
LRCH1Q9Y2L9 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRCH1Q9Y2L9 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
LRCH1Q9Y2L9 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
LRCH1Q9Y2L9 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
LRCH1Q9Y2L9 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.54■□□□□ 0.08
LRCH1Q9Y2L9 C1R-201ENST00000535233 2211 ntTSL 2 BASIC15.54■□□□□ 0.08
LRCH1Q9Y2L9 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRCH1Q9Y2L9 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRCH1Q9Y2L9 GUK1-204ENST00000366721 689 ntTSL 3 BASIC15.54■□□□□ 0.08
LRCH1Q9Y2L9 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
LRCH1Q9Y2L9 STARP1-201ENST00000397973 869 ntBASIC15.54■□□□□ 0.08
LRCH1Q9Y2L9 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRCH1Q9Y2L9 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC15.54■□□□□ 0.08
LRCH1Q9Y2L9 AL359075.1-203ENST00000462729 1002 ntBASIC15.54■□□□□ 0.08
LRCH1Q9Y2L9 POU5F1P6-201ENST00000466990 990 ntBASIC15.54■□□□□ 0.08
LRCH1Q9Y2L9 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC15.54■□□□□ 0.08
LRCH1Q9Y2L9 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC15.54■□□□□ 0.08
LRCH1Q9Y2L9 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC15.54■□□□□ 0.08
LRCH1Q9Y2L9 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRCH1Q9Y2L9 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LRCH1Q9Y2L9 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRCH1Q9Y2L9 OR2I1P-209ENST00000641730 5365 ntBASIC15.54■□□□□ 0.08
LRCH1Q9Y2L9 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.54■□□□□ 0.08
LRCH1Q9Y2L9 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRCH1Q9Y2L9 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRCH1Q9Y2L9 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
LRCH1Q9Y2L9 BEND3P1-201ENST00000421591 1944 ntBASIC15.54■□□□□ 0.08
LRCH1Q9Y2L9 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
LRCH1Q9Y2L9 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
LRCH1Q9Y2L9 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRCH1Q9Y2L9 SBF1P1-201ENST00000444527 5631 ntBASIC15.54■□□□□ 0.08
LRCH1Q9Y2L9 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LRCH1Q9Y2L9 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
LRCH1Q9Y2L9 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LRCH1Q9Y2L9 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRCH1Q9Y2L9 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRCH1Q9Y2L9 AC006504.5-208ENST00000588784 2401 ntBASIC15.54■□□□□ 0.08
LRCH1Q9Y2L9 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRCH1Q9Y2L9 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRCH1Q9Y2L9 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LRCH1Q9Y2L9 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRCH1Q9Y2L9 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC15.54■□□□□ 0.08
LRCH1Q9Y2L9 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LRCH1Q9Y2L9 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LRCH1Q9Y2L9 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRCH1Q9Y2L9 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRCH1Q9Y2L9 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC15.53■□□□□ 0.08
LRCH1Q9Y2L9 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRCH1Q9Y2L9 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRCH1Q9Y2L9 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRCH1Q9Y2L9 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LRCH1Q9Y2L9 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LRCH1Q9Y2L9 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRCH1Q9Y2L9 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRCH1Q9Y2L9 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRCH1Q9Y2L9 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
LRCH1Q9Y2L9 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
LRCH1Q9Y2L9 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRCH1Q9Y2L9 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRCH1Q9Y2L9 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC15.53■□□□□ 0.08
LRCH1Q9Y2L9 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC15.53■□□□□ 0.08
LRCH1Q9Y2L9 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
LRCH1Q9Y2L9 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC15.53■□□□□ 0.08
LRCH1Q9Y2L9 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC15.53■□□□□ 0.08
LRCH1Q9Y2L9 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LRCH1Q9Y2L9 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
LRCH1Q9Y2L9 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRCH1Q9Y2L9 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRCH1Q9Y2L9 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
LRCH1Q9Y2L9 GCSHP2-201ENST00000560971 527 ntBASIC15.53■□□□□ 0.08
LRCH1Q9Y2L9 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
LRCH1Q9Y2L9 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
LRCH1Q9Y2L9 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC15.53■□□□□ 0.08
LRCH1Q9Y2L9 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
LRCH1Q9Y2L9 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.53■□□□□ 0.08
LRCH1Q9Y2L9 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRCH1Q9Y2L9 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC15.53■□□□□ 0.08
LRCH1Q9Y2L9 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRCH1Q9Y2L9 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LRCH1Q9Y2L9 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC15.53■□□□□ 0.08
LRCH1Q9Y2L9 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRCH1Q9Y2L9 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LRCH1Q9Y2L9 MROH4P-201ENST00000431302 1578 ntBASIC15.53■□□□□ 0.08
LRCH1Q9Y2L9 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms