Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.51■□□□□ 0.39
SSX2IPQ9Y2D8 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SSX2IPQ9Y2D8 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
SSX2IPQ9Y2D8 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SSX2IPQ9Y2D8 RPS19-201ENST00000221975 500 ntTSL 3 BASIC17.51■□□□□ 0.39
SSX2IPQ9Y2D8 CALY-202ENST00000368555 783 ntTSL 2 BASIC17.51■□□□□ 0.39
SSX2IPQ9Y2D8 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SSX2IPQ9Y2D8 GK-202ENST00000378941 458 ntTSL 3 BASIC17.51■□□□□ 0.39
SSX2IPQ9Y2D8 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SSX2IPQ9Y2D8 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC17.51■□□□□ 0.39
SSX2IPQ9Y2D8 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
SSX2IPQ9Y2D8 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.51■□□□□ 0.39
SSX2IPQ9Y2D8 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SSX2IPQ9Y2D8 AC009477.1-201ENST00000452936 217 ntBASIC17.51■□□□□ 0.39
SSX2IPQ9Y2D8 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC17.51■□□□□ 0.39
SSX2IPQ9Y2D8 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC17.51■□□□□ 0.39
SSX2IPQ9Y2D8 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC17.51■□□□□ 0.39
SSX2IPQ9Y2D8 PUDP-206ENST00000540122 825 ntTSL 2 BASIC17.51■□□□□ 0.39
SSX2IPQ9Y2D8 AC105021.1-202ENST00000570572 669 ntBASIC17.51■□□□□ 0.39
SSX2IPQ9Y2D8 PRR29-204ENST00000577953 565 ntTSL 4 BASIC17.51■□□□□ 0.39
SSX2IPQ9Y2D8 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
SSX2IPQ9Y2D8 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC17.51■□□□□ 0.39
SSX2IPQ9Y2D8 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.51■□□□□ 0.39
SSX2IPQ9Y2D8 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SSX2IPQ9Y2D8 TEX28P1-201ENST00000613479 1221 ntBASIC17.51■□□□□ 0.39
SSX2IPQ9Y2D8 TEX28P2-201ENST00000617764 1221 ntBASIC17.51■□□□□ 0.39
SSX2IPQ9Y2D8 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC17.51■□□□□ 0.39
SSX2IPQ9Y2D8 AC025048.6-201ENST00000634326 1161 ntBASIC17.51■□□□□ 0.39
SSX2IPQ9Y2D8 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
SSX2IPQ9Y2D8 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
SSX2IPQ9Y2D8 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
SSX2IPQ9Y2D8 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SSX2IPQ9Y2D8 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SSX2IPQ9Y2D8 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SSX2IPQ9Y2D8 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SSX2IPQ9Y2D8 TDG-209ENST00000544861 1387 ntTSL 2 BASIC17.51■□□□□ 0.39
SSX2IPQ9Y2D8 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SSX2IPQ9Y2D8 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.51■□□□□ 0.39
SSX2IPQ9Y2D8 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SSX2IPQ9Y2D8 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.51■□□□□ 0.39
SSX2IPQ9Y2D8 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SSX2IPQ9Y2D8 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC17.5■□□□□ 0.39
SSX2IPQ9Y2D8 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SSX2IPQ9Y2D8 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.5■□□□□ 0.39
SSX2IPQ9Y2D8 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SSX2IPQ9Y2D8 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SSX2IPQ9Y2D8 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SSX2IPQ9Y2D8 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.5■□□□□ 0.39
SSX2IPQ9Y2D8 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.5■□□□□ 0.39
SSX2IPQ9Y2D8 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
SSX2IPQ9Y2D8 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
SSX2IPQ9Y2D8 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SSX2IPQ9Y2D8 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SSX2IPQ9Y2D8 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SSX2IPQ9Y2D8 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.5■□□□□ 0.39
SSX2IPQ9Y2D8 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC17.5■□□□□ 0.39
SSX2IPQ9Y2D8 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
SSX2IPQ9Y2D8 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SSX2IPQ9Y2D8 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC17.5■□□□□ 0.39
SSX2IPQ9Y2D8 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SSX2IPQ9Y2D8 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.5■□□□□ 0.39
SSX2IPQ9Y2D8 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC17.5■□□□□ 0.39
SSX2IPQ9Y2D8 AC020765.3-201ENST00000613051 740 ntBASIC17.5■□□□□ 0.39
SSX2IPQ9Y2D8 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SSX2IPQ9Y2D8 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SSX2IPQ9Y2D8 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.5■□□□□ 0.39
SSX2IPQ9Y2D8 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
SSX2IPQ9Y2D8 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.5■□□□□ 0.39
SSX2IPQ9Y2D8 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SSX2IPQ9Y2D8 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.5■□□□□ 0.39
SSX2IPQ9Y2D8 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SSX2IPQ9Y2D8 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SSX2IPQ9Y2D8 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SSX2IPQ9Y2D8 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SSX2IPQ9Y2D8 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SSX2IPQ9Y2D8 CROCCP2-202ENST00000412962 2773 ntBASIC17.5■□□□□ 0.39
SSX2IPQ9Y2D8 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SSX2IPQ9Y2D8 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.5■□□□□ 0.39
SSX2IPQ9Y2D8 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SSX2IPQ9Y2D8 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
SSX2IPQ9Y2D8 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.49■□□□□ 0.39
SSX2IPQ9Y2D8 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC17.49■□□□□ 0.39
SSX2IPQ9Y2D8 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SSX2IPQ9Y2D8 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SSX2IPQ9Y2D8 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.49■□□□□ 0.39
SSX2IPQ9Y2D8 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SSX2IPQ9Y2D8 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SSX2IPQ9Y2D8 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SSX2IPQ9Y2D8 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SSX2IPQ9Y2D8 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.49■□□□□ 0.39
SSX2IPQ9Y2D8 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SSX2IPQ9Y2D8 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC17.49■□□□□ 0.39
SSX2IPQ9Y2D8 SPTLC1P1-201ENST00000447199 261 ntBASIC17.49■□□□□ 0.39
SSX2IPQ9Y2D8 AP005018.1-201ENST00000525475 301 ntBASIC17.49■□□□□ 0.39
SSX2IPQ9Y2D8 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC17.49■□□□□ 0.39
SSX2IPQ9Y2D8 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SSX2IPQ9Y2D8 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SSX2IPQ9Y2D8 AC018695.7-201ENST00000624587 2492 ntBASIC17.49■□□□□ 0.39
SSX2IPQ9Y2D8 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SSX2IPQ9Y2D8 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms