Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC17.12■□□□□ 0.33
CDH9Q9ULB4 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
CDH9Q9ULB4 AC009477.1-201ENST00000452936 217 ntBASIC17.12■□□□□ 0.33
CDH9Q9ULB4 UGT1A2P-201ENST00000454886 866 ntBASIC17.12■□□□□ 0.33
CDH9Q9ULB4 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC17.12■□□□□ 0.33
CDH9Q9ULB4 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDH9Q9ULB4 COQ9-214ENST00000567933 882 ntTSL 3 BASIC17.12■□□□□ 0.33
CDH9Q9ULB4 MIR4745-201ENST00000577608 62 ntBASIC17.12■□□□□ 0.33
CDH9Q9ULB4 AL844908.2-201ENST00000609461 460 ntBASIC17.12■□□□□ 0.33
CDH9Q9ULB4 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH9Q9ULB4 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH9Q9ULB4 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.12■□□□□ 0.33
CDH9Q9ULB4 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC17.12■□□□□ 0.33
CDH9Q9ULB4 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC17.12■□□□□ 0.33
CDH9Q9ULB4 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH9Q9ULB4 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDH9Q9ULB4 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC17.12■□□□□ 0.33
CDH9Q9ULB4 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CDH9Q9ULB4 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.11■□□□□ 0.33
CDH9Q9ULB4 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH9Q9ULB4 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH9Q9ULB4 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDH9Q9ULB4 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.11■□□□□ 0.33
CDH9Q9ULB4 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CDH9Q9ULB4 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDH9Q9ULB4 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH9Q9ULB4 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.11■□□□□ 0.33
CDH9Q9ULB4 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.11■□□□□ 0.33
CDH9Q9ULB4 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH9Q9ULB4 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDH9Q9ULB4 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC17.11■□□□□ 0.33
CDH9Q9ULB4 MRPS18AP1-201ENST00000414458 589 ntBASIC17.11■□□□□ 0.33
CDH9Q9ULB4 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC17.11■□□□□ 0.33
CDH9Q9ULB4 TSPY16P-201ENST00000449843 468 ntBASIC17.11■□□□□ 0.33
CDH9Q9ULB4 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC17.11■□□□□ 0.33
CDH9Q9ULB4 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC17.11■□□□□ 0.33
CDH9Q9ULB4 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC17.11■□□□□ 0.33
CDH9Q9ULB4 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC17.11■□□□□ 0.33
CDH9Q9ULB4 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC17.11■□□□□ 0.33
CDH9Q9ULB4 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDH9Q9ULB4 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDH9Q9ULB4 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDH9Q9ULB4 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC17.11■□□□□ 0.33
CDH9Q9ULB4 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CDH9Q9ULB4 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
CDH9Q9ULB4 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.11■□□□□ 0.33
CDH9Q9ULB4 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH9Q9ULB4 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CDH9Q9ULB4 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.11■□□□□ 0.33
CDH9Q9ULB4 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH9Q9ULB4 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH9Q9ULB4 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CDH9Q9ULB4 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH9Q9ULB4 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CDH9Q9ULB4 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDH9Q9ULB4 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH9Q9ULB4 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CDH9Q9ULB4 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.1■□□□□ 0.33
CDH9Q9ULB4 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH9Q9ULB4 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CDH9Q9ULB4 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDH9Q9ULB4 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH9Q9ULB4 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH9Q9ULB4 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDH9Q9ULB4 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH9Q9ULB4 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
CDH9Q9ULB4 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.1■□□□□ 0.33
CDH9Q9ULB4 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
CDH9Q9ULB4 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC17.1■□□□□ 0.33
CDH9Q9ULB4 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CDH9Q9ULB4 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC17.1■□□□□ 0.33
CDH9Q9ULB4 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH9Q9ULB4 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH9Q9ULB4 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH9Q9ULB4 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDH9Q9ULB4 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDH9Q9ULB4 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH9Q9ULB4 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH9Q9ULB4 HAUS4P1-201ENST00000406739 1145 ntBASIC17.1■□□□□ 0.33
CDH9Q9ULB4 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH9Q9ULB4 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC17.1■□□□□ 0.33
CDH9Q9ULB4 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC17.1■□□□□ 0.33
CDH9Q9ULB4 RN7SL618P-201ENST00000477850 296 ntBASIC17.1■□□□□ 0.33
CDH9Q9ULB4 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH9Q9ULB4 ZNF890P-202ENST00000530367 1156 ntBASIC17.1■□□□□ 0.33
CDH9Q9ULB4 AL512361.1-201ENST00000554200 418 ntBASIC17.1■□□□□ 0.33
CDH9Q9ULB4 AL033527.5-202ENST00000641632 1098 ntBASIC17.1■□□□□ 0.33
CDH9Q9ULB4 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDH9Q9ULB4 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH9Q9ULB4 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH9Q9ULB4 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH9Q9ULB4 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH9Q9ULB4 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.1■□□□□ 0.33
CDH9Q9ULB4 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH9Q9ULB4 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH9Q9ULB4 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH9Q9ULB4 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC17.09■□□□□ 0.33
CDH9Q9ULB4 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
CDH9Q9ULB4 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CDH9Q9ULB4 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms