Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
RIMBP3Q9UFD9 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC25.07■■□□□ 1.6
RIMBP3Q9UFD9 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
RIMBP3Q9UFD9 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
RIMBP3Q9UFD9 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
RIMBP3Q9UFD9 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
RIMBP3Q9UFD9 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC25.07■■□□□ 1.6
RIMBP3Q9UFD9 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC25.07■■□□□ 1.6
RIMBP3Q9UFD9 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC25.07■■□□□ 1.6
RIMBP3Q9UFD9 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC25.07■■□□□ 1.6
RIMBP3Q9UFD9 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC25.07■■□□□ 1.6
RIMBP3Q9UFD9 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
RIMBP3Q9UFD9 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
RIMBP3Q9UFD9 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC25.06■■□□□ 1.6
RIMBP3Q9UFD9 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
RIMBP3Q9UFD9 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
RIMBP3Q9UFD9 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
RIMBP3Q9UFD9 AC016396.2-201ENST00000562575 1417 ntBASIC25.06■■□□□ 1.6
RIMBP3Q9UFD9 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
RIMBP3Q9UFD9 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC25.06■■□□□ 1.6
RIMBP3Q9UFD9 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
RIMBP3Q9UFD9 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC25.06■■□□□ 1.6
RIMBP3Q9UFD9 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC25.06■■□□□ 1.6
RIMBP3Q9UFD9 AC018463.1-201ENST00000456674 917 ntBASIC25.06■■□□□ 1.6
RIMBP3Q9UFD9 RPL18AP3-201ENST00000462885 528 ntBASIC25.06■■□□□ 1.6
RIMBP3Q9UFD9 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC25.06■■□□□ 1.6
RIMBP3Q9UFD9 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC25.06■■□□□ 1.6
RIMBP3Q9UFD9 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC25.06■■□□□ 1.6
RIMBP3Q9UFD9 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC25.06■■□□□ 1.6
RIMBP3Q9UFD9 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
RIMBP3Q9UFD9 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
RIMBP3Q9UFD9 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
RIMBP3Q9UFD9 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC25.06■■□□□ 1.6
RIMBP3Q9UFD9 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
RIMBP3Q9UFD9 AL031731.1-201ENST00000642131 2094 ntBASIC25.06■■□□□ 1.6
RIMBP3Q9UFD9 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RIMBP3Q9UFD9 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RIMBP3Q9UFD9 AP000356.3-201ENST00000382243 753 ntBASIC25.05■■□□□ 1.6
RIMBP3Q9UFD9 GAPDHP40-201ENST00000505218 1006 ntBASIC25.05■■□□□ 1.6
RIMBP3Q9UFD9 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC25.05■■□□□ 1.6
RIMBP3Q9UFD9 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC25.05■■□□□ 1.6
RIMBP3Q9UFD9 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC25.05■■□□□ 1.6
RIMBP3Q9UFD9 PTPN20CP-201ENST00000614090 920 ntBASIC25.05■■□□□ 1.6
RIMBP3Q9UFD9 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RIMBP3Q9UFD9 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RIMBP3Q9UFD9 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC25.05■■□□□ 1.6
RIMBP3Q9UFD9 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC25.05■■□□□ 1.6
RIMBP3Q9UFD9 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RIMBP3Q9UFD9 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC25.05■■□□□ 1.6
RIMBP3Q9UFD9 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
RIMBP3Q9UFD9 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
RIMBP3Q9UFD9 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
RIMBP3Q9UFD9 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
RIMBP3Q9UFD9 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RIMBP3Q9UFD9 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RIMBP3Q9UFD9 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC25.05■■□□□ 1.6
RIMBP3Q9UFD9 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RIMBP3Q9UFD9 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RIMBP3Q9UFD9 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC25.04■■□□□ 1.6
RIMBP3Q9UFD9 TMCO5B-205ENST00000530020 894 ntBASIC25.04■■□□□ 1.6
RIMBP3Q9UFD9 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC25.04■■□□□ 1.6
RIMBP3Q9UFD9 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC25.04■■□□□ 1.6
RIMBP3Q9UFD9 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RIMBP3Q9UFD9 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RIMBP3Q9UFD9 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC25.04■■□□□ 1.6
RIMBP3Q9UFD9 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC25.04■■□□□ 1.6
RIMBP3Q9UFD9 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RIMBP3Q9UFD9 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC25.04■■□□□ 1.6
RIMBP3Q9UFD9 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC25.04■■□□□ 1.6
RIMBP3Q9UFD9 TPM3P8-201ENST00000330554 643 ntBASIC25.04■■□□□ 1.6
RIMBP3Q9UFD9 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC25.04■■□□□ 1.6
RIMBP3Q9UFD9 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
RIMBP3Q9UFD9 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC25.04■■□□□ 1.6
RIMBP3Q9UFD9 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
RIMBP3Q9UFD9 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
RIMBP3Q9UFD9 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RIMBP3Q9UFD9 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
RIMBP3Q9UFD9 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
RIMBP3Q9UFD9 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
RIMBP3Q9UFD9 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
RIMBP3Q9UFD9 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC25.03■■□□□ 1.6
RIMBP3Q9UFD9 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
RIMBP3Q9UFD9 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC25.03■■□□□ 1.6
RIMBP3Q9UFD9 AC004899.1-201ENST00000424687 1714 ntBASIC25.03■■□□□ 1.6
RIMBP3Q9UFD9 HPGD-203ENST00000422112 805 ntTSL 2 BASIC25.03■■□□□ 1.6
RIMBP3Q9UFD9 HCG27-204ENST00000424675 895 ntTSL 3 BASIC25.03■■□□□ 1.6
RIMBP3Q9UFD9 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
RIMBP3Q9UFD9 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC25.03■■□□□ 1.6
RIMBP3Q9UFD9 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC25.03■■□□□ 1.6
RIMBP3Q9UFD9 AC007718.1-201ENST00000621078 280 ntBASIC25.03■■□□□ 1.6
RIMBP3Q9UFD9 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
RIMBP3Q9UFD9 CYP2AB1P-202ENST00000454440 1456 ntBASIC25.03■■□□□ 1.6
RIMBP3Q9UFD9 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC25.03■■□□□ 1.6
RIMBP3Q9UFD9 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC25.03■■□□□ 1.6
RIMBP3Q9UFD9 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
RIMBP3Q9UFD9 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
RIMBP3Q9UFD9 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC25.02■■□□□ 1.6
RIMBP3Q9UFD9 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC25.02■■□□□ 1.6
RIMBP3Q9UFD9 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC25.02■■□□□ 1.6
RIMBP3Q9UFD9 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms