Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.36■□□□□ 0.05
THUMPD1Q9NXG2 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
THUMPD1Q9NXG2 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
THUMPD1Q9NXG2 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
THUMPD1Q9NXG2 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
THUMPD1Q9NXG2 AC112504.1-201ENST00000623415 1841 ntBASIC15.36■□□□□ 0.05
THUMPD1Q9NXG2 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
THUMPD1Q9NXG2 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
THUMPD1Q9NXG2 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
THUMPD1Q9NXG2 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
THUMPD1Q9NXG2 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
THUMPD1Q9NXG2 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.35■□□□□ 0.05
THUMPD1Q9NXG2 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
THUMPD1Q9NXG2 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
THUMPD1Q9NXG2 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
THUMPD1Q9NXG2 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
THUMPD1Q9NXG2 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.35■□□□□ 0.05
THUMPD1Q9NXG2 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
THUMPD1Q9NXG2 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
THUMPD1Q9NXG2 AC022532.1-201ENST00000624563 1728 ntBASIC15.35■□□□□ 0.05
THUMPD1Q9NXG2 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
THUMPD1Q9NXG2 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.35■□□□□ 0.05
THUMPD1Q9NXG2 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
THUMPD1Q9NXG2 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC15.35■□□□□ 0.05
THUMPD1Q9NXG2 AC004870.1-201ENST00000315132 882 ntBASIC15.35■□□□□ 0.05
THUMPD1Q9NXG2 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC15.35■□□□□ 0.05
THUMPD1Q9NXG2 HMGA1P7-201ENST00000406908 502 ntBASIC15.35■□□□□ 0.05
THUMPD1Q9NXG2 AL513480.1-201ENST00000451731 511 ntBASIC15.35■□□□□ 0.05
THUMPD1Q9NXG2 PPIE-208ENST00000470213 927 ntTSL 3 BASIC15.35■□□□□ 0.05
THUMPD1Q9NXG2 AC108751.1-201ENST00000490852 363 ntBASIC15.35■□□□□ 0.05
THUMPD1Q9NXG2 AC093909.1-201ENST00000504731 1122 ntBASIC15.35■□□□□ 0.05
THUMPD1Q9NXG2 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
THUMPD1Q9NXG2 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
THUMPD1Q9NXG2 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
THUMPD1Q9NXG2 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15.35■□□□□ 0.05
THUMPD1Q9NXG2 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.35■□□□□ 0.05
THUMPD1Q9NXG2 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
THUMPD1Q9NXG2 MIR4751-201ENST00000578027 74 ntBASIC15.35■□□□□ 0.05
THUMPD1Q9NXG2 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC15.35■□□□□ 0.05
THUMPD1Q9NXG2 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
THUMPD1Q9NXG2 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
THUMPD1Q9NXG2 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.35■□□□□ 0.05
THUMPD1Q9NXG2 PRKN-208ENST00000610470 531 ntTSL 2 BASIC15.35■□□□□ 0.05
THUMPD1Q9NXG2 PRKN-209ENST00000612485 225 ntTSL 5 BASIC15.35■□□□□ 0.05
THUMPD1Q9NXG2 AL773604.1-201ENST00000617417 272 ntBASIC15.35■□□□□ 0.05
THUMPD1Q9NXG2 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
THUMPD1Q9NXG2 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.35■□□□□ 0.05
THUMPD1Q9NXG2 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
THUMPD1Q9NXG2 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
THUMPD1Q9NXG2 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
THUMPD1Q9NXG2 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.35■□□□□ 0.05
THUMPD1Q9NXG2 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
THUMPD1Q9NXG2 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.35■□□□□ 0.05
THUMPD1Q9NXG2 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.34■□□□□ 0.05
THUMPD1Q9NXG2 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
THUMPD1Q9NXG2 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.34■□□□□ 0.05
THUMPD1Q9NXG2 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
THUMPD1Q9NXG2 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
THUMPD1Q9NXG2 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
THUMPD1Q9NXG2 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
THUMPD1Q9NXG2 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
THUMPD1Q9NXG2 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.34■□□□□ 0.05
THUMPD1Q9NXG2 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
THUMPD1Q9NXG2 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
THUMPD1Q9NXG2 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.34■□□□□ 0.05
THUMPD1Q9NXG2 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
THUMPD1Q9NXG2 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.34■□□□□ 0.05
THUMPD1Q9NXG2 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.34■□□□□ 0.05
THUMPD1Q9NXG2 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.34■□□□□ 0.05
THUMPD1Q9NXG2 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.34■□□□□ 0.05
THUMPD1Q9NXG2 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
THUMPD1Q9NXG2 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
THUMPD1Q9NXG2 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.34■□□□□ 0.05
THUMPD1Q9NXG2 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
THUMPD1Q9NXG2 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
THUMPD1Q9NXG2 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
THUMPD1Q9NXG2 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.34■□□□□ 0.05
THUMPD1Q9NXG2 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
THUMPD1Q9NXG2 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.34■□□□□ 0.05
THUMPD1Q9NXG2 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
THUMPD1Q9NXG2 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
THUMPD1Q9NXG2 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
THUMPD1Q9NXG2 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.34■□□□□ 0.05
THUMPD1Q9NXG2 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.34■□□□□ 0.05
THUMPD1Q9NXG2 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
THUMPD1Q9NXG2 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
THUMPD1Q9NXG2 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.34■□□□□ 0.05
THUMPD1Q9NXG2 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.34■□□□□ 0.05
THUMPD1Q9NXG2 AC068587.6-202ENST00000641839 5619 ntBASIC15.34■□□□□ 0.05
THUMPD1Q9NXG2 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
THUMPD1Q9NXG2 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.34■□□□□ 0.05
THUMPD1Q9NXG2 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
THUMPD1Q9NXG2 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
THUMPD1Q9NXG2 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
THUMPD1Q9NXG2 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.33■□□□□ 0.05
THUMPD1Q9NXG2 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.33■□□□□ 0.05
THUMPD1Q9NXG2 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
THUMPD1Q9NXG2 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.33■□□□□ 0.05
THUMPD1Q9NXG2 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
THUMPD1Q9NXG2 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.33■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms