Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 AC027307.2-201ENST00000591252 911 ntBASIC14.28□□□□□ -0.12
CDH20Q9HBT6 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CDH20Q9HBT6 AL691403.2-201ENST00000618460 490 ntBASIC14.28□□□□□ -0.12
CDH20Q9HBT6 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
CDH20Q9HBT6 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CDH20Q9HBT6 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDH20Q9HBT6 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
CDH20Q9HBT6 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CDH20Q9HBT6 ALOX12P2-203ENST00000570921 1945 ntBASIC14.27□□□□□ -0.12
CDH20Q9HBT6 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC14.27□□□□□ -0.12
CDH20Q9HBT6 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.27□□□□□ -0.12
CDH20Q9HBT6 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CDH20Q9HBT6 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CDH20Q9HBT6 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CDH20Q9HBT6 UXT-AS1-201ENST00000590504 1525 ntBASIC14.27□□□□□ -0.12
CDH20Q9HBT6 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CDH20Q9HBT6 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
CDH20Q9HBT6 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CDH20Q9HBT6 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
CDH20Q9HBT6 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CDH20Q9HBT6 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDH20Q9HBT6 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
CDH20Q9HBT6 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.27□□□□□ -0.13
CDH20Q9HBT6 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDH20Q9HBT6 RPS8P6-201ENST00000426177 609 ntBASIC14.27□□□□□ -0.13
CDH20Q9HBT6 AC005237.2-201ENST00000434368 219 ntBASIC14.27□□□□□ -0.13
CDH20Q9HBT6 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDH20Q9HBT6 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
CDH20Q9HBT6 AP000344.2-201ENST00000512987 629 ntBASIC14.27□□□□□ -0.13
CDH20Q9HBT6 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC14.27□□□□□ -0.13
CDH20Q9HBT6 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC14.27□□□□□ -0.13
CDH20Q9HBT6 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC14.27□□□□□ -0.13
CDH20Q9HBT6 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.27□□□□□ -0.13
CDH20Q9HBT6 RNF34-208ENST00000555076 593 ntTSL 3 BASIC14.27□□□□□ -0.13
CDH20Q9HBT6 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.27□□□□□ -0.13
CDH20Q9HBT6 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.27□□□□□ -0.13
CDH20Q9HBT6 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.27□□□□□ -0.13
CDH20Q9HBT6 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.27□□□□□ -0.13
CDH20Q9HBT6 AC008267.7-201ENST00000624570 1194 ntBASIC14.27□□□□□ -0.13
CDH20Q9HBT6 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.27□□□□□ -0.13
CDH20Q9HBT6 AC134684.3-201ENST00000641758 218 ntBASIC14.27□□□□□ -0.13
CDH20Q9HBT6 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDH20Q9HBT6 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDH20Q9HBT6 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.13
CDH20Q9HBT6 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDH20Q9HBT6 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CDH20Q9HBT6 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDH20Q9HBT6 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDH20Q9HBT6 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CDH20Q9HBT6 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
CDH20Q9HBT6 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CDH20Q9HBT6 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDH20Q9HBT6 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.27□□□□□ -0.13
CDH20Q9HBT6 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDH20Q9HBT6 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
CDH20Q9HBT6 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDH20Q9HBT6 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC14.27□□□□□ -0.13
CDH20Q9HBT6 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDH20Q9HBT6 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CDH20Q9HBT6 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDH20Q9HBT6 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC14.26□□□□□ -0.13
CDH20Q9HBT6 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.26□□□□□ -0.13
CDH20Q9HBT6 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDH20Q9HBT6 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDH20Q9HBT6 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDH20Q9HBT6 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.26□□□□□ -0.13
CDH20Q9HBT6 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CDH20Q9HBT6 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CDH20Q9HBT6 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CDH20Q9HBT6 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDH20Q9HBT6 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CDH20Q9HBT6 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
CDH20Q9HBT6 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CDH20Q9HBT6 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDH20Q9HBT6 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC14.26□□□□□ -0.13
CDH20Q9HBT6 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC14.26□□□□□ -0.13
CDH20Q9HBT6 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CDH20Q9HBT6 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CDH20Q9HBT6 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CDH20Q9HBT6 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC14.26□□□□□ -0.13
CDH20Q9HBT6 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
CDH20Q9HBT6 AC105233.2-201ENST00000523697 349 ntBASIC14.26□□□□□ -0.13
CDH20Q9HBT6 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
CDH20Q9HBT6 AF228730.5-201ENST00000530288 346 ntBASIC14.26□□□□□ -0.13
CDH20Q9HBT6 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CDH20Q9HBT6 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC14.26□□□□□ -0.13
CDH20Q9HBT6 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.26□□□□□ -0.13
CDH20Q9HBT6 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CDH20Q9HBT6 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC14.26□□□□□ -0.13
CDH20Q9HBT6 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CDH20Q9HBT6 AC105339.1-204ENST00000636249 355 ntBASIC14.26□□□□□ -0.13
CDH20Q9HBT6 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDH20Q9HBT6 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CDH20Q9HBT6 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDH20Q9HBT6 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDH20Q9HBT6 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.26□□□□□ -0.13
CDH20Q9HBT6 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC14.26□□□□□ -0.13
CDH20Q9HBT6 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDH20Q9HBT6 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.26□□□□□ -0.13
CDH20Q9HBT6 AC005622.1-201ENST00000636801 1703 ntBASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms