Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VPS11Q9H270 AC020765.3-201ENST00000613051 740 ntBASIC16.43■□□□□ 0.22
VPS11Q9H270 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
VPS11Q9H270 PGM5P2-202ENST00000637225 1043 ntBASIC16.43■□□□□ 0.22
VPS11Q9H270 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.43■□□□□ 0.22
VPS11Q9H270 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VPS11Q9H270 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.43■□□□□ 0.22
VPS11Q9H270 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VPS11Q9H270 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.43■□□□□ 0.22
VPS11Q9H270 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.43■□□□□ 0.22
VPS11Q9H270 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
VPS11Q9H270 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.43■□□□□ 0.22
VPS11Q9H270 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
VPS11Q9H270 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
VPS11Q9H270 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VPS11Q9H270 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
VPS11Q9H270 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.42■□□□□ 0.22
VPS11Q9H270 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
VPS11Q9H270 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
VPS11Q9H270 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
VPS11Q9H270 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
VPS11Q9H270 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VPS11Q9H270 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.42■□□□□ 0.22
VPS11Q9H270 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
VPS11Q9H270 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
VPS11Q9H270 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
VPS11Q9H270 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VPS11Q9H270 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
VPS11Q9H270 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
VPS11Q9H270 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VPS11Q9H270 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
VPS11Q9H270 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.42■□□□□ 0.22
VPS11Q9H270 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.42■□□□□ 0.22
VPS11Q9H270 AP003680.1-201ENST00000598970 3660 ntBASIC16.42■□□□□ 0.22
VPS11Q9H270 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VPS11Q9H270 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VPS11Q9H270 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.42■□□□□ 0.22
VPS11Q9H270 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
VPS11Q9H270 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VPS11Q9H270 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.42■□□□□ 0.22
VPS11Q9H270 RPS2P1-201ENST00000434010 821 ntBASIC16.42■□□□□ 0.22
VPS11Q9H270 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
VPS11Q9H270 OR7E14P-202ENST00000530490 1290 ntBASIC16.42■□□□□ 0.22
VPS11Q9H270 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.42■□□□□ 0.22
VPS11Q9H270 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.42■□□□□ 0.22
VPS11Q9H270 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
VPS11Q9H270 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.42■□□□□ 0.22
VPS11Q9H270 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.42■□□□□ 0.22
VPS11Q9H270 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VPS11Q9H270 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
VPS11Q9H270 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
VPS11Q9H270 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
VPS11Q9H270 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VPS11Q9H270 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
VPS11Q9H270 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
VPS11Q9H270 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VPS11Q9H270 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.42■□□□□ 0.22
VPS11Q9H270 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VPS11Q9H270 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VPS11Q9H270 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
VPS11Q9H270 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VPS11Q9H270 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VPS11Q9H270 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
VPS11Q9H270 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VPS11Q9H270 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.41■□□□□ 0.22
VPS11Q9H270 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.41■□□□□ 0.22
VPS11Q9H270 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
VPS11Q9H270 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.41■□□□□ 0.22
VPS11Q9H270 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
VPS11Q9H270 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
VPS11Q9H270 AP002414.2-201ENST00000591780 3365 ntBASIC16.41■□□□□ 0.22
VPS11Q9H270 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.41■□□□□ 0.22
VPS11Q9H270 AC136632.2-201ENST00000512891 861 ntBASIC16.41■□□□□ 0.22
VPS11Q9H270 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.41■□□□□ 0.22
VPS11Q9H270 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.41■□□□□ 0.22
VPS11Q9H270 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.41■□□□□ 0.22
VPS11Q9H270 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.41■□□□□ 0.22
VPS11Q9H270 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.41■□□□□ 0.22
VPS11Q9H270 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
VPS11Q9H270 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
VPS11Q9H270 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
VPS11Q9H270 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.41■□□□□ 0.22
VPS11Q9H270 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
VPS11Q9H270 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
VPS11Q9H270 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.41■□□□□ 0.22
VPS11Q9H270 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.41■□□□□ 0.22
VPS11Q9H270 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VPS11Q9H270 AL136379.1-201ENST00000623471 2642 ntBASIC16.41■□□□□ 0.22
VPS11Q9H270 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
VPS11Q9H270 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.41■□□□□ 0.22
VPS11Q9H270 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.41■□□□□ 0.22
VPS11Q9H270 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
VPS11Q9H270 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.41■□□□□ 0.22
VPS11Q9H270 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.41■□□□□ 0.22
VPS11Q9H270 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.41■□□□□ 0.22
VPS11Q9H270 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.4■□□□□ 0.22
VPS11Q9H270 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VPS11Q9H270 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
VPS11Q9H270 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.4■□□□□ 0.22
VPS11Q9H270 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms