Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
RSPO3Q9BXY4 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RSPO3Q9BXY4 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RSPO3Q9BXY4 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
RSPO3Q9BXY4 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RSPO3Q9BXY4 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RSPO3Q9BXY4 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
RSPO3Q9BXY4 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RSPO3Q9BXY4 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RSPO3Q9BXY4 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC14.89□□□□□ -0.03
RSPO3Q9BXY4 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.89□□□□□ -0.03
RSPO3Q9BXY4 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC14.89□□□□□ -0.03
RSPO3Q9BXY4 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC14.89□□□□□ -0.03
RSPO3Q9BXY4 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC14.89□□□□□ -0.03
RSPO3Q9BXY4 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.89□□□□□ -0.03
RSPO3Q9BXY4 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC14.89□□□□□ -0.03
RSPO3Q9BXY4 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC14.89□□□□□ -0.03
RSPO3Q9BXY4 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC14.89□□□□□ -0.03
RSPO3Q9BXY4 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.89□□□□□ -0.03
RSPO3Q9BXY4 PIN1-206ENST00000587625 878 ntTSL 2 BASIC14.89□□□□□ -0.03
RSPO3Q9BXY4 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RSPO3Q9BXY4 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC14.89□□□□□ -0.03
RSPO3Q9BXY4 AC092902.6-201ENST00000641783 218 ntBASIC14.89□□□□□ -0.03
RSPO3Q9BXY4 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.89□□□□□ -0.03
RSPO3Q9BXY4 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RSPO3Q9BXY4 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.89□□□□□ -0.03
RSPO3Q9BXY4 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RSPO3Q9BXY4 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RSPO3Q9BXY4 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
RSPO3Q9BXY4 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
RSPO3Q9BXY4 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC14.89□□□□□ -0.03
RSPO3Q9BXY4 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RSPO3Q9BXY4 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
RSPO3Q9BXY4 BSG-215ENST00000618006 1329 ntTSL 2 BASIC14.89□□□□□ -0.03
RSPO3Q9BXY4 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RSPO3Q9BXY4 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RSPO3Q9BXY4 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
RSPO3Q9BXY4 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
RSPO3Q9BXY4 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.88□□□□□ -0.03
RSPO3Q9BXY4 AC006486.2-201ENST00000624246 2199 ntBASIC14.88□□□□□ -0.03
RSPO3Q9BXY4 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.88□□□□□ -0.03
RSPO3Q9BXY4 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
RSPO3Q9BXY4 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RSPO3Q9BXY4 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RSPO3Q9BXY4 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
RSPO3Q9BXY4 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RSPO3Q9BXY4 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RSPO3Q9BXY4 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
RSPO3Q9BXY4 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.88□□□□□ -0.03
RSPO3Q9BXY4 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.88□□□□□ -0.03
RSPO3Q9BXY4 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RSPO3Q9BXY4 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RSPO3Q9BXY4 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RSPO3Q9BXY4 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC14.88□□□□□ -0.03
RSPO3Q9BXY4 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC14.88□□□□□ -0.03
RSPO3Q9BXY4 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
RSPO3Q9BXY4 HNRNPA1P28-201ENST00000424481 961 ntBASIC14.88□□□□□ -0.03
RSPO3Q9BXY4 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC14.88□□□□□ -0.03
RSPO3Q9BXY4 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.88□□□□□ -0.03
RSPO3Q9BXY4 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RSPO3Q9BXY4 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RSPO3Q9BXY4 COX5A-206ENST00000568783 571 ntTSL 3 BASIC14.88□□□□□ -0.03
RSPO3Q9BXY4 KLK8-205ENST00000593490 267 ntTSL 3 BASIC14.88□□□□□ -0.03
RSPO3Q9BXY4 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RSPO3Q9BXY4 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.88□□□□□ -0.03
RSPO3Q9BXY4 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RSPO3Q9BXY4 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RSPO3Q9BXY4 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RSPO3Q9BXY4 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.88□□□□□ -0.03
RSPO3Q9BXY4 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
RSPO3Q9BXY4 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
RSPO3Q9BXY4 PMS2P7-201ENST00000506558 1336 ntBASIC14.88□□□□□ -0.03
RSPO3Q9BXY4 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.88□□□□□ -0.03
RSPO3Q9BXY4 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RSPO3Q9BXY4 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.88□□□□□ -0.03
RSPO3Q9BXY4 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RSPO3Q9BXY4 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.88□□□□□ -0.03
RSPO3Q9BXY4 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RSPO3Q9BXY4 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RSPO3Q9BXY4 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.87□□□□□ -0.03
RSPO3Q9BXY4 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.87□□□□□ -0.03
RSPO3Q9BXY4 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.87□□□□□ -0.03
RSPO3Q9BXY4 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RSPO3Q9BXY4 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
RSPO3Q9BXY4 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
RSPO3Q9BXY4 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
RSPO3Q9BXY4 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RSPO3Q9BXY4 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RSPO3Q9BXY4 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RSPO3Q9BXY4 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.87□□□□□ -0.03
RSPO3Q9BXY4 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RSPO3Q9BXY4 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RSPO3Q9BXY4 BNIP3P1-202ENST00000550043 1585 ntBASIC14.87□□□□□ -0.03
RSPO3Q9BXY4 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RSPO3Q9BXY4 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
RSPO3Q9BXY4 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.87□□□□□ -0.03
RSPO3Q9BXY4 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.87□□□□□ -0.03
RSPO3Q9BXY4 AC142381.1-201ENST00000426099 345 ntBASIC14.87□□□□□ -0.03
RSPO3Q9BXY4 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.87□□□□□ -0.03
RSPO3Q9BXY4 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms