Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SSBP3Q9BWW4 FUK-207ENST00000571514 3054 ntTSL 2 BASIC13.62□□□□□ -0.23
SSBP3Q9BWW4 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SSBP3Q9BWW4 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SSBP3Q9BWW4 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SSBP3Q9BWW4 AP3S2-216ENST00000617003 1561 ntBASIC13.62□□□□□ -0.23
SSBP3Q9BWW4 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SSBP3Q9BWW4 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SSBP3Q9BWW4 AC078925.2-201ENST00000624013 1973 ntBASIC13.62□□□□□ -0.23
SSBP3Q9BWW4 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
SSBP3Q9BWW4 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
SSBP3Q9BWW4 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC13.61□□□□□ -0.23
SSBP3Q9BWW4 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
SSBP3Q9BWW4 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SSBP3Q9BWW4 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
SSBP3Q9BWW4 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SSBP3Q9BWW4 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SSBP3Q9BWW4 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SSBP3Q9BWW4 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
SSBP3Q9BWW4 GCK-202ENST00000345378 2421 ntTSL 2 BASIC13.61□□□□□ -0.23
SSBP3Q9BWW4 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC13.61□□□□□ -0.23
SSBP3Q9BWW4 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SSBP3Q9BWW4 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC13.61□□□□□ -0.23
SSBP3Q9BWW4 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
SSBP3Q9BWW4 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SSBP3Q9BWW4 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SSBP3Q9BWW4 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC13.61□□□□□ -0.23
SSBP3Q9BWW4 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
SSBP3Q9BWW4 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SSBP3Q9BWW4 BAD-202ENST00000394531 631 ntTSL 3 BASIC13.61□□□□□ -0.23
SSBP3Q9BWW4 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC13.61□□□□□ -0.23
SSBP3Q9BWW4 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC13.61□□□□□ -0.23
SSBP3Q9BWW4 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC13.61□□□□□ -0.23
SSBP3Q9BWW4 BAD-207ENST00000544785 525 ntTSL 3 BASIC13.61□□□□□ -0.23
SSBP3Q9BWW4 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC13.61□□□□□ -0.23
SSBP3Q9BWW4 AC011467.4-201ENST00000594891 528 ntBASIC13.61□□□□□ -0.23
SSBP3Q9BWW4 AC018529.1-201ENST00000613063 361 ntBASIC13.61□□□□□ -0.23
SSBP3Q9BWW4 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SSBP3Q9BWW4 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SSBP3Q9BWW4 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SSBP3Q9BWW4 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC13.61□□□□□ -0.23
SSBP3Q9BWW4 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC13.61□□□□□ -0.23
SSBP3Q9BWW4 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC13.61□□□□□ -0.23
SSBP3Q9BWW4 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
SSBP3Q9BWW4 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SSBP3Q9BWW4 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SSBP3Q9BWW4 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SSBP3Q9BWW4 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC13.61□□□□□ -0.23
SSBP3Q9BWW4 MYB-242ENST00000618728 3545 ntTSL 5 BASIC13.61□□□□□ -0.23
SSBP3Q9BWW4 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC13.61□□□□□ -0.23
SSBP3Q9BWW4 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SSBP3Q9BWW4 RNF216P1-203ENST00000404404 2427 ntBASIC13.61□□□□□ -0.23
SSBP3Q9BWW4 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SSBP3Q9BWW4 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
SSBP3Q9BWW4 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
SSBP3Q9BWW4 LINC02199-201ENST00000506655 2702 ntBASIC13.61□□□□□ -0.23
SSBP3Q9BWW4 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SSBP3Q9BWW4 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
SSBP3Q9BWW4 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
SSBP3Q9BWW4 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC13.6□□□□□ -0.23
SSBP3Q9BWW4 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
SSBP3Q9BWW4 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SSBP3Q9BWW4 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC13.6□□□□□ -0.23
SSBP3Q9BWW4 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC13.6□□□□□ -0.23
SSBP3Q9BWW4 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
SSBP3Q9BWW4 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SSBP3Q9BWW4 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SSBP3Q9BWW4 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SSBP3Q9BWW4 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
SSBP3Q9BWW4 AGGF1P2-201ENST00000426656 2106 ntBASIC13.6□□□□□ -0.23
SSBP3Q9BWW4 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC13.6□□□□□ -0.23
SSBP3Q9BWW4 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SSBP3Q9BWW4 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SSBP3Q9BWW4 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SSBP3Q9BWW4 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SSBP3Q9BWW4 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SSBP3Q9BWW4 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
SSBP3Q9BWW4 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SSBP3Q9BWW4 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SSBP3Q9BWW4 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SSBP3Q9BWW4 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC13.6□□□□□ -0.23
SSBP3Q9BWW4 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SSBP3Q9BWW4 HLA-A-202ENST00000376806 1854 ntBASIC13.6□□□□□ -0.23
SSBP3Q9BWW4 FAM220BP-201ENST00000377689 816 ntBASIC13.6□□□□□ -0.23
SSBP3Q9BWW4 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
SSBP3Q9BWW4 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC13.6□□□□□ -0.23
SSBP3Q9BWW4 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC13.6□□□□□ -0.23
SSBP3Q9BWW4 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC13.6□□□□□ -0.23
SSBP3Q9BWW4 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC13.6□□□□□ -0.23
SSBP3Q9BWW4 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC13.6□□□□□ -0.23
SSBP3Q9BWW4 AC093724.1-201ENST00000448659 1027 ntBASIC13.6□□□□□ -0.23
SSBP3Q9BWW4 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC13.6□□□□□ -0.23
SSBP3Q9BWW4 RNA5SP410-201ENST00000516285 106 ntBASIC13.6□□□□□ -0.23
SSBP3Q9BWW4 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC13.6□□□□□ -0.23
SSBP3Q9BWW4 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC13.6□□□□□ -0.23
SSBP3Q9BWW4 AC140878.1-201ENST00000565277 250 ntBASIC13.6□□□□□ -0.23
SSBP3Q9BWW4 AC051619.7-201ENST00000568314 623 ntBASIC13.6□□□□□ -0.23
SSBP3Q9BWW4 AC003101.2-201ENST00000612557 442 ntBASIC13.6□□□□□ -0.23
SSBP3Q9BWW4 FLJ38576-201ENST00000623820 2459 ntBASIC13.6□□□□□ -0.23
SSBP3Q9BWW4 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms