Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SMOQ99835 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
SMOQ99835 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
SMOQ99835 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SMOQ99835 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
SMOQ99835 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
SMOQ99835 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SMOQ99835 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SMOQ99835 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.98■□□□□ 0.31
SMOQ99835 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SMOQ99835 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SMOQ99835 HAUS4P1-201ENST00000406739 1145 ntBASIC16.98■□□□□ 0.31
SMOQ99835 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.98■□□□□ 0.31
SMOQ99835 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SMOQ99835 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.98■□□□□ 0.31
SMOQ99835 AL512361.1-201ENST00000554200 418 ntBASIC16.98■□□□□ 0.31
SMOQ99835 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.98■□□□□ 0.31
SMOQ99835 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SMOQ99835 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SMOQ99835 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.98■□□□□ 0.31
SMOQ99835 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SMOQ99835 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.98■□□□□ 0.31
SMOQ99835 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
SMOQ99835 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
SMOQ99835 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.98■□□□□ 0.31
SMOQ99835 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SMOQ99835 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SMOQ99835 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SMOQ99835 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SMOQ99835 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
SMOQ99835 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SMOQ99835 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.97■□□□□ 0.31
SMOQ99835 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.97■□□□□ 0.31
SMOQ99835 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.97■□□□□ 0.31
SMOQ99835 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
SMOQ99835 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.97■□□□□ 0.31
SMOQ99835 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
SMOQ99835 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
SMOQ99835 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SMOQ99835 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
SMOQ99835 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SMOQ99835 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SMOQ99835 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SMOQ99835 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SMOQ99835 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SMOQ99835 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SMOQ99835 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.97■□□□□ 0.31
SMOQ99835 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.97■□□□□ 0.31
SMOQ99835 AC009477.1-201ENST00000452936 217 ntBASIC16.97■□□□□ 0.31
SMOQ99835 AL512638.1-201ENST00000457493 794 ntBASIC16.97■□□□□ 0.31
SMOQ99835 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.97■□□□□ 0.31
SMOQ99835 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.97■□□□□ 0.31
SMOQ99835 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.97■□□□□ 0.31
SMOQ99835 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.97■□□□□ 0.31
SMOQ99835 AC009407.1-201ENST00000568958 598 ntBASIC16.97■□□□□ 0.31
SMOQ99835 AJ011932.1-201ENST00000621707 465 ntBASIC16.97■□□□□ 0.31
SMOQ99835 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.97■□□□□ 0.31
SMOQ99835 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SMOQ99835 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SMOQ99835 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.97■□□□□ 0.31
SMOQ99835 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.97■□□□□ 0.31
SMOQ99835 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SMOQ99835 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SMOQ99835 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SMOQ99835 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SMOQ99835 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SMOQ99835 BNIP3P1-202ENST00000550043 1585 ntBASIC16.97■□□□□ 0.31
SMOQ99835 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SMOQ99835 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SMOQ99835 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
SMOQ99835 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
SMOQ99835 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SMOQ99835 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SMOQ99835 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.97■□□□□ 0.31
SMOQ99835 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
SMOQ99835 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
SMOQ99835 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SMOQ99835 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
SMOQ99835 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SMOQ99835 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SMOQ99835 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SMOQ99835 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SMOQ99835 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.96■□□□□ 0.31
SMOQ99835 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SMOQ99835 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
SMOQ99835 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SMOQ99835 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SMOQ99835 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SMOQ99835 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.96■□□□□ 0.31
SMOQ99835 AC004987.2-201ENST00000395959 1148 ntBASIC16.96■□□□□ 0.31
SMOQ99835 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.96■□□□□ 0.31
SMOQ99835 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16.96■□□□□ 0.31
SMOQ99835 HIST3H2BA-201ENST00000436555 524 ntBASIC16.96■□□□□ 0.31
SMOQ99835 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.96■□□□□ 0.31
SMOQ99835 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.96■□□□□ 0.31
SMOQ99835 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.96■□□□□ 0.31
SMOQ99835 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SMOQ99835 AC243562.2-201ENST00000561247 970 ntBASIC16.96■□□□□ 0.31
SMOQ99835 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.96■□□□□ 0.31
SMOQ99835 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms