Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RAD9AQ99638 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.21■□□□□ 0.35
RAD9AQ99638 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.21■□□□□ 0.35
RAD9AQ99638 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAD9AQ99638 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAD9AQ99638 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.21■□□□□ 0.35
RAD9AQ99638 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAD9AQ99638 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
RAD9AQ99638 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAD9AQ99638 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAD9AQ99638 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAD9AQ99638 AC006538.1-201ENST00000567905 1585 ntBASIC17.21■□□□□ 0.35
RAD9AQ99638 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAD9AQ99638 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC17.21■□□□□ 0.35
RAD9AQ99638 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAD9AQ99638 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RAD9AQ99638 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC17.21■□□□□ 0.35
RAD9AQ99638 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC17.21■□□□□ 0.35
RAD9AQ99638 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC17.21■□□□□ 0.35
RAD9AQ99638 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC17.21■□□□□ 0.35
RAD9AQ99638 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC17.21■□□□□ 0.35
RAD9AQ99638 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAD9AQ99638 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
RAD9AQ99638 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC17.21■□□□□ 0.35
RAD9AQ99638 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC17.21■□□□□ 0.35
RAD9AQ99638 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC17.21■□□□□ 0.35
RAD9AQ99638 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
RAD9AQ99638 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAD9AQ99638 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC17.21■□□□□ 0.35
RAD9AQ99638 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAD9AQ99638 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
RAD9AQ99638 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAD9AQ99638 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAD9AQ99638 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
RAD9AQ99638 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
RAD9AQ99638 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAD9AQ99638 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
RAD9AQ99638 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
RAD9AQ99638 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
RAD9AQ99638 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
RAD9AQ99638 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAD9AQ99638 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.2■□□□□ 0.34
RAD9AQ99638 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.2■□□□□ 0.34
RAD9AQ99638 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
RAD9AQ99638 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAD9AQ99638 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC17.2■□□□□ 0.34
RAD9AQ99638 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAD9AQ99638 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RAD9AQ99638 ZBTB12BP-201ENST00000314232 1122 ntBASIC17.2■□□□□ 0.34
RAD9AQ99638 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RAD9AQ99638 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RAD9AQ99638 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAD9AQ99638 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC17.2■□□□□ 0.34
RAD9AQ99638 AC004945.1-201ENST00000416738 983 ntBASIC17.2■□□□□ 0.34
RAD9AQ99638 SOCS2P1-201ENST00000417727 557 ntBASIC17.2■□□□□ 0.34
RAD9AQ99638 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC17.2■□□□□ 0.34
RAD9AQ99638 YBX1P6-201ENST00000442962 1002 ntBASIC17.2■□□□□ 0.34
RAD9AQ99638 RPL13AP25-201ENST00000484130 612 ntBASIC17.2■□□□□ 0.34
RAD9AQ99638 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC17.2■□□□□ 0.34
RAD9AQ99638 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC17.2■□□□□ 0.34
RAD9AQ99638 AC079316.1-201ENST00000548397 411 ntBASIC17.2■□□□□ 0.34
RAD9AQ99638 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC17.2■□□□□ 0.34
RAD9AQ99638 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RAD9AQ99638 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC17.2■□□□□ 0.34
RAD9AQ99638 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC17.2■□□□□ 0.34
RAD9AQ99638 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC17.2■□□□□ 0.34
RAD9AQ99638 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RAD9AQ99638 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC17.2■□□□□ 0.34
RAD9AQ99638 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC17.2■□□□□ 0.34
RAD9AQ99638 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC17.2■□□□□ 0.34
RAD9AQ99638 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC17.2■□□□□ 0.34
RAD9AQ99638 PRORSD1P-202ENST00000563365 2154 ntBASIC17.2■□□□□ 0.34
RAD9AQ99638 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAD9AQ99638 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAD9AQ99638 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RAD9AQ99638 AL691432.1-201ENST00000596308 1422 ntBASIC17.2■□□□□ 0.34
RAD9AQ99638 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAD9AQ99638 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.2■□□□□ 0.34
RAD9AQ99638 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAD9AQ99638 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAD9AQ99638 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
RAD9AQ99638 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAD9AQ99638 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAD9AQ99638 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAD9AQ99638 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC17.19■□□□□ 0.34
RAD9AQ99638 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
RAD9AQ99638 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAD9AQ99638 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAD9AQ99638 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAD9AQ99638 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
RAD9AQ99638 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
RAD9AQ99638 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
RAD9AQ99638 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAD9AQ99638 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAD9AQ99638 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAD9AQ99638 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RAD9AQ99638 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RAD9AQ99638 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC17.19■□□□□ 0.34
RAD9AQ99638 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC17.19■□□□□ 0.34
RAD9AQ99638 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms