Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 GOLGA2P4-201ENST00000441462 777 ntBASIC16.72■□□□□ 0.27
CDCA3Q99618 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC16.72■□□□□ 0.27
CDCA3Q99618 KRT8P13-201ENST00000463294 1010 ntBASIC16.72■□□□□ 0.27
CDCA3Q99618 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC16.72■□□□□ 0.27
CDCA3Q99618 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.72■□□□□ 0.27
CDCA3Q99618 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC16.72■□□□□ 0.27
CDCA3Q99618 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC16.72■□□□□ 0.27
CDCA3Q99618 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDCA3Q99618 RN7SL560P-201ENST00000577943 264 ntBASIC16.72■□□□□ 0.27
CDCA3Q99618 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC16.72■□□□□ 0.27
CDCA3Q99618 AL354718.3-201ENST00000616414 581 ntBASIC16.72■□□□□ 0.27
CDCA3Q99618 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDCA3Q99618 CR382287.1-201ENST00000623954 586 ntBASIC16.72■□□□□ 0.27
CDCA3Q99618 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDCA3Q99618 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDCA3Q99618 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDCA3Q99618 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDCA3Q99618 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.72■□□□□ 0.27
CDCA3Q99618 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDCA3Q99618 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDCA3Q99618 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CDCA3Q99618 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
CDCA3Q99618 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDCA3Q99618 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDCA3Q99618 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC16.72■□□□□ 0.27
CDCA3Q99618 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDCA3Q99618 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDCA3Q99618 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDCA3Q99618 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CDCA3Q99618 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.71■□□□□ 0.27
CDCA3Q99618 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.71■□□□□ 0.27
CDCA3Q99618 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDCA3Q99618 AL592424.1-201ENST00000563624 1536 ntBASIC16.71■□□□□ 0.27
CDCA3Q99618 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDCA3Q99618 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.71■□□□□ 0.27
CDCA3Q99618 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.71■□□□□ 0.27
CDCA3Q99618 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDCA3Q99618 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDCA3Q99618 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDCA3Q99618 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDCA3Q99618 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDCA3Q99618 ACKR1-201ENST00000368121 1240 ntBASIC16.71■□□□□ 0.27
CDCA3Q99618 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDCA3Q99618 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
CDCA3Q99618 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC16.71■□□□□ 0.27
CDCA3Q99618 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDCA3Q99618 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CDCA3Q99618 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDCA3Q99618 AC093433.1-201ENST00000458048 571 ntBASIC16.71■□□□□ 0.27
CDCA3Q99618 VDAC1P7-201ENST00000462417 847 ntBASIC16.71■□□□□ 0.27
CDCA3Q99618 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC16.71■□□□□ 0.27
CDCA3Q99618 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CDCA3Q99618 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
CDCA3Q99618 AC023310.1-201ENST00000554836 735 ntBASIC16.71■□□□□ 0.27
CDCA3Q99618 LARP4-220ENST00000615080 856 ntTSL 5 BASIC16.71■□□□□ 0.27
CDCA3Q99618 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC16.71■□□□□ 0.27
CDCA3Q99618 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDCA3Q99618 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDCA3Q99618 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.71■□□□□ 0.27
CDCA3Q99618 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.71■□□□□ 0.27
CDCA3Q99618 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDCA3Q99618 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDCA3Q99618 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDCA3Q99618 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.26
CDCA3Q99618 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDCA3Q99618 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDCA3Q99618 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDCA3Q99618 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDCA3Q99618 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDCA3Q99618 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDCA3Q99618 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDCA3Q99618 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDCA3Q99618 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDCA3Q99618 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
CDCA3Q99618 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.7■□□□□ 0.26
CDCA3Q99618 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDCA3Q99618 AC006033.1-201ENST00000440505 426 ntBASIC16.7■□□□□ 0.26
CDCA3Q99618 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC16.7■□□□□ 0.26
CDCA3Q99618 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
CDCA3Q99618 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDCA3Q99618 RIT1-205ENST00000539040 919 ntTSL 2 BASIC16.7■□□□□ 0.26
CDCA3Q99618 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDCA3Q99618 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC16.7■□□□□ 0.26
CDCA3Q99618 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC16.7■□□□□ 0.26
CDCA3Q99618 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC16.7■□□□□ 0.26
CDCA3Q99618 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC16.7■□□□□ 0.26
CDCA3Q99618 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDCA3Q99618 AC091271.1-201ENST00000611877 1162 ntBASIC16.7■□□□□ 0.26
CDCA3Q99618 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDCA3Q99618 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDCA3Q99618 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDCA3Q99618 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDCA3Q99618 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDCA3Q99618 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.7■□□□□ 0.26
CDCA3Q99618 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDCA3Q99618 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.7■□□□□ 0.26
CDCA3Q99618 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
CDCA3Q99618 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC16.7■□□□□ 0.26
CDCA3Q99618 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDCA3Q99618 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms