Protein–RNA interactions for Protein: Q99504

EYA3, Eyes absent homolog 3, humanhuman

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EYA3Q99504 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC19.61■□□□□ 0.73
EYA3Q99504 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
EYA3Q99504 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC19.61■□□□□ 0.73
EYA3Q99504 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC19.61■□□□□ 0.73
EYA3Q99504 PKD1P1-201ENST00000458669 6805 ntBASIC19.61■□□□□ 0.73
EYA3Q99504 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
EYA3Q99504 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC19.61■□□□□ 0.73
EYA3Q99504 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
EYA3Q99504 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
EYA3Q99504 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
EYA3Q99504 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
EYA3Q99504 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
EYA3Q99504 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
EYA3Q99504 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
EYA3Q99504 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
EYA3Q99504 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
EYA3Q99504 AL442647.2-201ENST00000429864 857 ntBASIC19.6■□□□□ 0.73
EYA3Q99504 ELP6-209ENST00000446787 894 ntTSL 3 BASIC19.6■□□□□ 0.73
EYA3Q99504 CROCCP4-201ENST00000457096 498 ntBASIC19.6■□□□□ 0.73
EYA3Q99504 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC19.6■□□□□ 0.73
EYA3Q99504 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC19.6■□□□□ 0.73
EYA3Q99504 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC19.6■□□□□ 0.73
EYA3Q99504 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC19.6■□□□□ 0.73
EYA3Q99504 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
EYA3Q99504 LINC01115-203ENST00000606068 577 ntBASIC19.6■□□□□ 0.73
EYA3Q99504 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
EYA3Q99504 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
EYA3Q99504 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
EYA3Q99504 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
EYA3Q99504 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
EYA3Q99504 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC19.6■□□□□ 0.73
EYA3Q99504 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
EYA3Q99504 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
EYA3Q99504 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC19.59■□□□□ 0.73
EYA3Q99504 AL691432.1-201ENST00000596308 1422 ntBASIC19.59■□□□□ 0.73
EYA3Q99504 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
EYA3Q99504 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC19.59■□□□□ 0.73
EYA3Q99504 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC19.59■□□□□ 0.73
EYA3Q99504 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
EYA3Q99504 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
EYA3Q99504 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
EYA3Q99504 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC19.59■□□□□ 0.73
EYA3Q99504 RPF1-202ENST00000370656 724 ntTSL 2 BASIC19.59■□□□□ 0.73
EYA3Q99504 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
EYA3Q99504 AL162726.2-201ENST00000438986 1017 ntBASIC19.59■□□□□ 0.73
EYA3Q99504 USP32P1-208ENST00000506594 1164 ntBASIC19.59■□□□□ 0.73
EYA3Q99504 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC19.59■□□□□ 0.73
EYA3Q99504 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
EYA3Q99504 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC19.59■□□□□ 0.73
EYA3Q99504 AC233724.13-201ENST00000598383 410 ntBASIC19.59■□□□□ 0.73
EYA3Q99504 AC133539.2-201ENST00000604757 467 ntBASIC19.59■□□□□ 0.73
EYA3Q99504 AL391069.4-201ENST00000609583 481 ntBASIC19.59■□□□□ 0.73
EYA3Q99504 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC19.59■□□□□ 0.73
EYA3Q99504 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC19.59■□□□□ 0.73
EYA3Q99504 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
EYA3Q99504 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
EYA3Q99504 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
EYA3Q99504 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
EYA3Q99504 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
EYA3Q99504 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
EYA3Q99504 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC19.58■□□□□ 0.73
EYA3Q99504 AC012313.1-201ENST00000593393 3059 ntBASIC19.58■□□□□ 0.73
EYA3Q99504 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
EYA3Q99504 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
EYA3Q99504 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC19.58■□□□□ 0.73
EYA3Q99504 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
EYA3Q99504 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC19.58■□□□□ 0.73
EYA3Q99504 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
EYA3Q99504 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
EYA3Q99504 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
EYA3Q99504 AC005915.1-201ENST00000624912 2018 ntBASIC19.58■□□□□ 0.73
EYA3Q99504 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
EYA3Q99504 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC19.58■□□□□ 0.73
EYA3Q99504 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
EYA3Q99504 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
EYA3Q99504 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
EYA3Q99504 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
EYA3Q99504 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
EYA3Q99504 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
EYA3Q99504 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
EYA3Q99504 EEF1DP4-201ENST00000446006 880 ntBASIC19.58■□□□□ 0.72
EYA3Q99504 POU5F1P6-201ENST00000466990 990 ntBASIC19.58■□□□□ 0.72
EYA3Q99504 AC243562.2-201ENST00000561247 970 ntBASIC19.58■□□□□ 0.72
EYA3Q99504 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC19.58■□□□□ 0.72
EYA3Q99504 AL158212.4-201ENST00000624062 1286 ntBASIC19.58■□□□□ 0.72
EYA3Q99504 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
EYA3Q99504 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
EYA3Q99504 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
EYA3Q99504 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
EYA3Q99504 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
EYA3Q99504 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
EYA3Q99504 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC19.58■□□□□ 0.72
EYA3Q99504 KRT8P22-201ENST00000562317 1415 ntBASIC19.58■□□□□ 0.72
EYA3Q99504 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
EYA3Q99504 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
EYA3Q99504 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
EYA3Q99504 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC19.57■□□□□ 0.72
EYA3Q99504 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
EYA3Q99504 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
EYA3Q99504 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms