Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC18.85■□□□□ 0.61
CCDC17Q96LX7 FTH1-202ENST00000526640 786 ntTSL 2 BASIC18.85■□□□□ 0.61
CCDC17Q96LX7 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC18.85■□□□□ 0.61
CCDC17Q96LX7 AC055876.2-201ENST00000531834 546 ntBASIC18.85■□□□□ 0.61
CCDC17Q96LX7 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC18.85■□□□□ 0.61
CCDC17Q96LX7 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC17Q96LX7 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC18.85■□□□□ 0.61
CCDC17Q96LX7 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CCDC17Q96LX7 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
CCDC17Q96LX7 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC17Q96LX7 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC18.85■□□□□ 0.61
CCDC17Q96LX7 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC17Q96LX7 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.85■□□□□ 0.61
CCDC17Q96LX7 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC17Q96LX7 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC17Q96LX7 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC18.85■□□□□ 0.61
CCDC17Q96LX7 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC17Q96LX7 BNIP3P1-202ENST00000550043 1585 ntBASIC18.85■□□□□ 0.61
CCDC17Q96LX7 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC18.85■□□□□ 0.61
CCDC17Q96LX7 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC17Q96LX7 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC17Q96LX7 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC17Q96LX7 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC17Q96LX7 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC18.84■□□□□ 0.61
CCDC17Q96LX7 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC17Q96LX7 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
CCDC17Q96LX7 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
CCDC17Q96LX7 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
CCDC17Q96LX7 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC17Q96LX7 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC17Q96LX7 HAUS4P1-201ENST00000406739 1145 ntBASIC18.84■□□□□ 0.61
CCDC17Q96LX7 WBP2-203ENST00000433525 928 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC17Q96LX7 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC18.84■□□□□ 0.61
CCDC17Q96LX7 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC17Q96LX7 TPRX2P-201ENST00000535362 881 ntBASIC18.84■□□□□ 0.61
CCDC17Q96LX7 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC18.84■□□□□ 0.61
CCDC17Q96LX7 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC18.84■□□□□ 0.61
CCDC17Q96LX7 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC18.84■□□□□ 0.61
CCDC17Q96LX7 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC18.84■□□□□ 0.61
CCDC17Q96LX7 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC18.84■□□□□ 0.61
CCDC17Q96LX7 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC17Q96LX7 AC099568.2-201ENST00000609194 695 ntBASIC18.84■□□□□ 0.61
CCDC17Q96LX7 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC18.84■□□□□ 0.61
CCDC17Q96LX7 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC17Q96LX7 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC18.84■□□□□ 0.61
CCDC17Q96LX7 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
CCDC17Q96LX7 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC17Q96LX7 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC17Q96LX7 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC17Q96LX7 ZBTB45P2-201ENST00000452245 1531 ntBASIC18.84■□□□□ 0.61
CCDC17Q96LX7 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
CCDC17Q96LX7 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC17Q96LX7 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC17Q96LX7 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC17Q96LX7 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC17Q96LX7 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
CCDC17Q96LX7 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.61
CCDC17Q96LX7 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.83■□□□□ 0.61
CCDC17Q96LX7 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC18.83■□□□□ 0.61
CCDC17Q96LX7 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC17Q96LX7 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC18.83■□□□□ 0.61
CCDC17Q96LX7 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC17Q96LX7 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
CCDC17Q96LX7 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC17Q96LX7 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CCDC17Q96LX7 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC17Q96LX7 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC18.83■□□□□ 0.6
CCDC17Q96LX7 AC098614.1-201ENST00000368528 745 ntBASIC18.83■□□□□ 0.6
CCDC17Q96LX7 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
CCDC17Q96LX7 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC18.83■□□□□ 0.6
CCDC17Q96LX7 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC18.83■□□□□ 0.6
CCDC17Q96LX7 GSAP-205ENST00000430584 600 ntTSL 5 BASIC18.83■□□□□ 0.6
CCDC17Q96LX7 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC18.83■□□□□ 0.6
CCDC17Q96LX7 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC18.83■□□□□ 0.6
CCDC17Q96LX7 TIMM17BP1-201ENST00000545713 516 ntBASIC18.83■□□□□ 0.6
CCDC17Q96LX7 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC18.83■□□□□ 0.6
CCDC17Q96LX7 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC18.83■□□□□ 0.6
CCDC17Q96LX7 SRP9-204ENST00000619790 377 ntTSL 2 BASIC18.83■□□□□ 0.6
CCDC17Q96LX7 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC18.83■□□□□ 0.6
CCDC17Q96LX7 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC17Q96LX7 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CCDC17Q96LX7 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC17Q96LX7 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC17Q96LX7 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC17Q96LX7 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CCDC17Q96LX7 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC18.83■□□□□ 0.6
CCDC17Q96LX7 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC17Q96LX7 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CCDC17Q96LX7 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC18.83■□□□□ 0.6
CCDC17Q96LX7 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CCDC17Q96LX7 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC17Q96LX7 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC17Q96LX7 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC17Q96LX7 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC17Q96LX7 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC17Q96LX7 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC17Q96LX7 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC17Q96LX7 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.82■□□□□ 0.6
CCDC17Q96LX7 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC17Q96LX7 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms