Protein–RNA interactions for Protein: Q96C10

DHX58, Probable ATP-dependent RNA helicase DHX58, humanhuman

Predictions only

Length 678 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHX58Q96C10 AC069224.1-201ENST00000566372 1715 ntBASIC18.41■□□□□ 0.54
DHX58Q96C10 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
DHX58Q96C10 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DHX58Q96C10 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DHX58Q96C10 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DHX58Q96C10 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DHX58Q96C10 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
DHX58Q96C10 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.41■□□□□ 0.54
DHX58Q96C10 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.41■□□□□ 0.54
DHX58Q96C10 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC18.41■□□□□ 0.54
DHX58Q96C10 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC18.41■□□□□ 0.54
DHX58Q96C10 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.41■□□□□ 0.54
DHX58Q96C10 SMN2-210ENST00000511812 867 ntTSL 2 BASIC18.41■□□□□ 0.54
DHX58Q96C10 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
DHX58Q96C10 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC18.41■□□□□ 0.54
DHX58Q96C10 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC18.41■□□□□ 0.54
DHX58Q96C10 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
DHX58Q96C10 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC18.41■□□□□ 0.54
DHX58Q96C10 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC18.41■□□□□ 0.54
DHX58Q96C10 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC18.41■□□□□ 0.54
DHX58Q96C10 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
DHX58Q96C10 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
DHX58Q96C10 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
DHX58Q96C10 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
DHX58Q96C10 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC18.41■□□□□ 0.54
DHX58Q96C10 ZNF259P1-201ENST00000407656 1365 ntBASIC18.41■□□□□ 0.54
DHX58Q96C10 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC18.41■□□□□ 0.54
DHX58Q96C10 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
DHX58Q96C10 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
DHX58Q96C10 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DHX58Q96C10 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
DHX58Q96C10 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC18.4■□□□□ 0.54
DHX58Q96C10 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
DHX58Q96C10 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DHX58Q96C10 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
DHX58Q96C10 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
DHX58Q96C10 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
DHX58Q96C10 AP003680.1-201ENST00000598970 3660 ntBASIC18.4■□□□□ 0.54
DHX58Q96C10 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DHX58Q96C10 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
DHX58Q96C10 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
DHX58Q96C10 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DHX58Q96C10 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DHX58Q96C10 MIR648-201ENST00000385046 94 ntBASIC18.4■□□□□ 0.54
DHX58Q96C10 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
DHX58Q96C10 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC18.4■□□□□ 0.54
DHX58Q96C10 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC18.4■□□□□ 0.54
DHX58Q96C10 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
DHX58Q96C10 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC18.4■□□□□ 0.54
DHX58Q96C10 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC18.4■□□□□ 0.54
DHX58Q96C10 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC18.4■□□□□ 0.54
DHX58Q96C10 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC18.4■□□□□ 0.54
DHX58Q96C10 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC18.4■□□□□ 0.54
DHX58Q96C10 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC18.4■□□□□ 0.54
DHX58Q96C10 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC18.4■□□□□ 0.54
DHX58Q96C10 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC18.4■□□□□ 0.54
DHX58Q96C10 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC18.4■□□□□ 0.54
DHX58Q96C10 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC18.4■□□□□ 0.54
DHX58Q96C10 MBP-202ENST00000355994 2772 ntTSL 5 BASIC18.4■□□□□ 0.54
DHX58Q96C10 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC18.4■□□□□ 0.54
DHX58Q96C10 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC18.39■□□□□ 0.54
DHX58Q96C10 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
DHX58Q96C10 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
DHX58Q96C10 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
DHX58Q96C10 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
DHX58Q96C10 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
DHX58Q96C10 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
DHX58Q96C10 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
DHX58Q96C10 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
DHX58Q96C10 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC18.39■□□□□ 0.53
DHX58Q96C10 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
DHX58Q96C10 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC18.39■□□□□ 0.53
DHX58Q96C10 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
DHX58Q96C10 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
DHX58Q96C10 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC18.39■□□□□ 0.53
DHX58Q96C10 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC18.39■□□□□ 0.53
DHX58Q96C10 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC18.39■□□□□ 0.53
DHX58Q96C10 AC068137.2-201ENST00000605408 478 ntBASIC18.39■□□□□ 0.53
DHX58Q96C10 BX640515.1-201ENST00000617215 977 ntBASIC18.39■□□□□ 0.53
DHX58Q96C10 AC092865.6-201ENST00000642101 219 ntBASIC18.39■□□□□ 0.53
DHX58Q96C10 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC18.39■□□□□ 0.53
DHX58Q96C10 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
DHX58Q96C10 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
DHX58Q96C10 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
DHX58Q96C10 AC073439.1-201ENST00000624121 1774 ntBASIC18.39■□□□□ 0.53
DHX58Q96C10 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
DHX58Q96C10 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC18.39■□□□□ 0.53
DHX58Q96C10 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
DHX58Q96C10 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
DHX58Q96C10 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
DHX58Q96C10 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC18.39■□□□□ 0.53
DHX58Q96C10 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
DHX58Q96C10 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC18.39■□□□□ 0.53
DHX58Q96C10 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC18.39■□□□□ 0.53
DHX58Q96C10 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC18.39■□□□□ 0.53
DHX58Q96C10 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC18.39■□□□□ 0.53
DHX58Q96C10 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
DHX58Q96C10 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
DHX58Q96C10 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC18.38■□□□□ 0.53
DHX58Q96C10 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms