Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 IGHV3OR16-7-201ENST00000604106 360 ntBASIC14.5□□□□□ -0.09
RFT1Q96AA3 AL353135.1-201ENST00000606729 504 ntBASIC14.5□□□□□ -0.09
RFT1Q96AA3 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.5□□□□□ -0.09
RFT1Q96AA3 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
RFT1Q96AA3 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.5□□□□□ -0.09
RFT1Q96AA3 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
RFT1Q96AA3 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.5□□□□□ -0.09
RFT1Q96AA3 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RFT1Q96AA3 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RFT1Q96AA3 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RFT1Q96AA3 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
RFT1Q96AA3 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RFT1Q96AA3 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.49□□□□□ -0.09
RFT1Q96AA3 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RFT1Q96AA3 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RFT1Q96AA3 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
RFT1Q96AA3 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC14.49□□□□□ -0.09
RFT1Q96AA3 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RFT1Q96AA3 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
RFT1Q96AA3 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RFT1Q96AA3 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RFT1Q96AA3 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
RFT1Q96AA3 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.49□□□□□ -0.09
RFT1Q96AA3 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.49□□□□□ -0.09
RFT1Q96AA3 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RFT1Q96AA3 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RFT1Q96AA3 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RFT1Q96AA3 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.49□□□□□ -0.09
RFT1Q96AA3 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
RFT1Q96AA3 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.49□□□□□ -0.09
RFT1Q96AA3 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.49□□□□□ -0.09
RFT1Q96AA3 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.49□□□□□ -0.09
RFT1Q96AA3 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RFT1Q96AA3 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
RFT1Q96AA3 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RFT1Q96AA3 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC14.49□□□□□ -0.09
RFT1Q96AA3 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
RFT1Q96AA3 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC14.49□□□□□ -0.09
RFT1Q96AA3 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC14.49□□□□□ -0.09
RFT1Q96AA3 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RFT1Q96AA3 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RFT1Q96AA3 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
RFT1Q96AA3 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.49□□□□□ -0.09
RFT1Q96AA3 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RFT1Q96AA3 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RFT1Q96AA3 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.49□□□□□ -0.09
RFT1Q96AA3 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.49□□□□□ -0.09
RFT1Q96AA3 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.49□□□□□ -0.09
RFT1Q96AA3 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RFT1Q96AA3 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
RFT1Q96AA3 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RFT1Q96AA3 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RFT1Q96AA3 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RFT1Q96AA3 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
RFT1Q96AA3 KRT8P49-201ENST00000604166 1432 ntBASIC14.49□□□□□ -0.09
RFT1Q96AA3 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
RFT1Q96AA3 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RFT1Q96AA3 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC14.48□□□□□ -0.09
RFT1Q96AA3 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RFT1Q96AA3 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
RFT1Q96AA3 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RFT1Q96AA3 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RFT1Q96AA3 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
RFT1Q96AA3 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.48□□□□□ -0.09
RFT1Q96AA3 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RFT1Q96AA3 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.48□□□□□ -0.09
RFT1Q96AA3 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
RFT1Q96AA3 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RFT1Q96AA3 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RFT1Q96AA3 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RFT1Q96AA3 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
RFT1Q96AA3 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.48□□□□□ -0.09
RFT1Q96AA3 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RFT1Q96AA3 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
RFT1Q96AA3 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RFT1Q96AA3 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC14.48□□□□□ -0.09
RFT1Q96AA3 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC14.48□□□□□ -0.09
RFT1Q96AA3 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
RFT1Q96AA3 NKAPP1-205ENST00000585790 367 ntBASIC14.48□□□□□ -0.09
RFT1Q96AA3 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
RFT1Q96AA3 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC14.48□□□□□ -0.09
RFT1Q96AA3 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RFT1Q96AA3 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
RFT1Q96AA3 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.48□□□□□ -0.09
RFT1Q96AA3 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.48□□□□□ -0.09
RFT1Q96AA3 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
RFT1Q96AA3 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.48□□□□□ -0.09
RFT1Q96AA3 GGT3P-204ENST00000453783 1664 ntBASIC14.48□□□□□ -0.09
RFT1Q96AA3 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
RFT1Q96AA3 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.48□□□□□ -0.09
RFT1Q96AA3 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RFT1Q96AA3 NCF1C-201ENST00000438382 1427 ntBASIC14.48□□□□□ -0.09
RFT1Q96AA3 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
RFT1Q96AA3 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
RFT1Q96AA3 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RFT1Q96AA3 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.48□□□□□ -0.09
RFT1Q96AA3 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RFT1Q96AA3 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
RFT1Q96AA3 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RFT1Q96AA3 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms