Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PTP4A1Q93096 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
PTP4A1Q93096 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
PTP4A1Q93096 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PTP4A1Q93096 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PTP4A1Q93096 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PTP4A1Q93096 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PTP4A1Q93096 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
PTP4A1Q93096 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
PTP4A1Q93096 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PTP4A1Q93096 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.66□□□□□ -0.06
PTP4A1Q93096 AP002414.3-201ENST00000589352 1468 ntBASIC14.66□□□□□ -0.06
PTP4A1Q93096 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PTP4A1Q93096 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PTP4A1Q93096 HMGA1P7-201ENST00000406908 502 ntBASIC14.66□□□□□ -0.06
PTP4A1Q93096 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PTP4A1Q93096 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.66□□□□□ -0.06
PTP4A1Q93096 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.66□□□□□ -0.06
PTP4A1Q93096 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC14.66□□□□□ -0.06
PTP4A1Q93096 AC009078.2-202ENST00000463353 338 ntBASIC14.66□□□□□ -0.06
PTP4A1Q93096 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC14.66□□□□□ -0.06
PTP4A1Q93096 AC092910.1-201ENST00000482027 1129 ntBASIC14.66□□□□□ -0.06
PTP4A1Q93096 PENK-208ENST00000523051 772 ntTSL 5 BASIC14.66□□□□□ -0.06
PTP4A1Q93096 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC14.66□□□□□ -0.06
PTP4A1Q93096 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.66□□□□□ -0.06
PTP4A1Q93096 KLK8-205ENST00000593490 267 ntTSL 3 BASIC14.66□□□□□ -0.06
PTP4A1Q93096 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC14.66□□□□□ -0.06
PTP4A1Q93096 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC14.66□□□□□ -0.06
PTP4A1Q93096 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PTP4A1Q93096 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
PTP4A1Q93096 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.66□□□□□ -0.06
PTP4A1Q93096 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PTP4A1Q93096 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PTP4A1Q93096 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
PTP4A1Q93096 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.66□□□□□ -0.06
PTP4A1Q93096 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
PTP4A1Q93096 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
PTP4A1Q93096 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.66□□□□□ -0.06
PTP4A1Q93096 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
PTP4A1Q93096 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PTP4A1Q93096 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PTP4A1Q93096 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC14.66□□□□□ -0.06
PTP4A1Q93096 PPT1-215ENST00000641471 2368 ntBASIC14.66□□□□□ -0.06
PTP4A1Q93096 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
PTP4A1Q93096 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
PTP4A1Q93096 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PTP4A1Q93096 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PTP4A1Q93096 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PTP4A1Q93096 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.65□□□□□ -0.06
PTP4A1Q93096 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.65□□□□□ -0.06
PTP4A1Q93096 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.65□□□□□ -0.06
PTP4A1Q93096 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PTP4A1Q93096 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PTP4A1Q93096 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
PTP4A1Q93096 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.65□□□□□ -0.06
PTP4A1Q93096 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PTP4A1Q93096 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.65□□□□□ -0.06
PTP4A1Q93096 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
PTP4A1Q93096 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
PTP4A1Q93096 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
PTP4A1Q93096 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.65□□□□□ -0.06
PTP4A1Q93096 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.65□□□□□ -0.06
PTP4A1Q93096 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
PTP4A1Q93096 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PTP4A1Q93096 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
PTP4A1Q93096 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
PTP4A1Q93096 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PTP4A1Q93096 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PTP4A1Q93096 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.65□□□□□ -0.06
PTP4A1Q93096 RNU1-129P-201ENST00000384064 167 ntBASIC14.65□□□□□ -0.06
PTP4A1Q93096 MRPL20P1-201ENST00000400819 433 ntBASIC14.65□□□□□ -0.06
PTP4A1Q93096 CENPM-204ENST00000402420 688 ntTSL 5 BASIC14.65□□□□□ -0.06
PTP4A1Q93096 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC14.65□□□□□ -0.06
PTP4A1Q93096 SLC4A1APP2-201ENST00000424054 1259 ntBASIC14.65□□□□□ -0.06
PTP4A1Q93096 U1.21-201ENST00000580816 167 ntBASIC14.65□□□□□ -0.06
PTP4A1Q93096 AL121894.2-201ENST00000602977 491 ntBASIC14.65□□□□□ -0.06
PTP4A1Q93096 AC116407.3-201ENST00000623905 1129 ntBASIC14.65□□□□□ -0.06
PTP4A1Q93096 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC14.65□□□□□ -0.06
PTP4A1Q93096 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
PTP4A1Q93096 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PTP4A1Q93096 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
PTP4A1Q93096 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PTP4A1Q93096 AC092919.2-201ENST00000623631 1645 ntBASIC14.65□□□□□ -0.06
PTP4A1Q93096 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
PTP4A1Q93096 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
PTP4A1Q93096 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PTP4A1Q93096 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
PTP4A1Q93096 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.65□□□□□ -0.06
PTP4A1Q93096 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PTP4A1Q93096 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
PTP4A1Q93096 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PTP4A1Q93096 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
PTP4A1Q93096 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.64□□□□□ -0.07
PTP4A1Q93096 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PTP4A1Q93096 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PTP4A1Q93096 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PTP4A1Q93096 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
PTP4A1Q93096 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
PTP4A1Q93096 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC14.64□□□□□ -0.07
PTP4A1Q93096 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms