Protein–RNA interactions for Protein: Q8WXC6

COPS9, COP9 signalosome complex subunit 9, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS9Q8WXC6 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
COPS9Q8WXC6 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC11.03□□□□□ -0.64
COPS9Q8WXC6 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC11.03□□□□□ -0.64
COPS9Q8WXC6 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
COPS9Q8WXC6 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
COPS9Q8WXC6 MTMR3-202ENST00000333027 8906 ntTSL 5 BASIC11.03□□□□□ -0.64
COPS9Q8WXC6 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
COPS9Q8WXC6 FAM220CP-201ENST00000395253 831 ntBASIC11.03□□□□□ -0.64
COPS9Q8WXC6 FAM8A6P-201ENST00000407496 1135 ntBASIC11.03□□□□□ -0.64
COPS9Q8WXC6 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC11.03□□□□□ -0.64
COPS9Q8WXC6 AC107956.1-201ENST00000494359 873 ntBASIC11.03□□□□□ -0.64
COPS9Q8WXC6 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC11.03□□□□□ -0.64
COPS9Q8WXC6 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
COPS9Q8WXC6 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
COPS9Q8WXC6 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
COPS9Q8WXC6 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
COPS9Q8WXC6 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
COPS9Q8WXC6 PCGF3-213ENST00000620529 1899 ntBASIC11.03□□□□□ -0.64
COPS9Q8WXC6 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
COPS9Q8WXC6 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
COPS9Q8WXC6 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
COPS9Q8WXC6 TG-201ENST00000220616 8450 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
COPS9Q8WXC6 EBF2-203ENST00000520164 5145 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
COPS9Q8WXC6 WARS-232ENST00000556645 2508 ntTSL 5 BASIC11.03□□□□□ -0.64
COPS9Q8WXC6 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC11.03□□□□□ -0.64
COPS9Q8WXC6 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
COPS9Q8WXC6 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC11.03□□□□□ -0.64
COPS9Q8WXC6 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
COPS9Q8WXC6 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
COPS9Q8WXC6 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC11.03□□□□□ -0.64
COPS9Q8WXC6 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
COPS9Q8WXC6 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC11.03□□□□□ -0.64
COPS9Q8WXC6 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
COPS9Q8WXC6 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
COPS9Q8WXC6 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
COPS9Q8WXC6 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
COPS9Q8WXC6 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
COPS9Q8WXC6 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
COPS9Q8WXC6 MROH4P-201ENST00000431302 1578 ntBASIC11.03□□□□□ -0.64
COPS9Q8WXC6 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
COPS9Q8WXC6 AL049757.1-201ENST00000616842 1596 ntBASIC11.03□□□□□ -0.64
COPS9Q8WXC6 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC11.03□□□□□ -0.64
COPS9Q8WXC6 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC11.03□□□□□ -0.64
COPS9Q8WXC6 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
COPS9Q8WXC6 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC11.02□□□□□ -0.64
COPS9Q8WXC6 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.64
COPS9Q8WXC6 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
COPS9Q8WXC6 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.64
COPS9Q8WXC6 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
COPS9Q8WXC6 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC11.02□□□□□ -0.64
COPS9Q8WXC6 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
COPS9Q8WXC6 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC11.02□□□□□ -0.64
COPS9Q8WXC6 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
COPS9Q8WXC6 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
COPS9Q8WXC6 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC11.02□□□□□ -0.64
COPS9Q8WXC6 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
COPS9Q8WXC6 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC11.02□□□□□ -0.64
COPS9Q8WXC6 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
COPS9Q8WXC6 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
COPS9Q8WXC6 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
COPS9Q8WXC6 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC11.02□□□□□ -0.65
COPS9Q8WXC6 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
COPS9Q8WXC6 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC11.02□□□□□ -0.65
COPS9Q8WXC6 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
COPS9Q8WXC6 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
COPS9Q8WXC6 MTMR3-201ENST00000323630 5866 ntTSL 5 BASIC11.02□□□□□ -0.65
COPS9Q8WXC6 GFRA1-203ENST00000369236 9109 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
COPS9Q8WXC6 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
COPS9Q8WXC6 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
COPS9Q8WXC6 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
COPS9Q8WXC6 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC11.02□□□□□ -0.65
COPS9Q8WXC6 RPS2P55-201ENST00000397318 883 ntBASIC11.02□□□□□ -0.65
COPS9Q8WXC6 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
COPS9Q8WXC6 KLF4P1-201ENST00000412782 1185 ntBASIC11.02□□□□□ -0.65
COPS9Q8WXC6 AC007967.3-201ENST00000434308 558 ntBASIC11.02□□□□□ -0.65
COPS9Q8WXC6 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC11.02□□□□□ -0.65
COPS9Q8WXC6 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC11.02□□□□□ -0.65
COPS9Q8WXC6 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
COPS9Q8WXC6 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
COPS9Q8WXC6 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC11.02□□□□□ -0.65
COPS9Q8WXC6 NAV1-203ENST00000367302 9685 ntTSL 5 BASIC11.02□□□□□ -0.65
COPS9Q8WXC6 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC11.02□□□□□ -0.65
COPS9Q8WXC6 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC11.02□□□□□ -0.65
COPS9Q8WXC6 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
COPS9Q8WXC6 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC11.02□□□□□ -0.65
COPS9Q8WXC6 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC11.02□□□□□ -0.65
COPS9Q8WXC6 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
COPS9Q8WXC6 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
COPS9Q8WXC6 LMCD1-201ENST00000157600 8405 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
COPS9Q8WXC6 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
COPS9Q8WXC6 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
COPS9Q8WXC6 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
COPS9Q8WXC6 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
COPS9Q8WXC6 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
COPS9Q8WXC6 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC11.02□□□□□ -0.65
COPS9Q8WXC6 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
COPS9Q8WXC6 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
COPS9Q8WXC6 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC11.02□□□□□ -0.65
COPS9Q8WXC6 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
COPS9Q8WXC6 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms