Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC19.04■□□□□ 0.64
SMARCC2Q8TAQ2 GGCT-205ENST00000409436 954 ntTSL 3 BASIC19.04■□□□□ 0.64
SMARCC2Q8TAQ2 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SMARCC2Q8TAQ2 IGHV3-62-201ENST00000520057 340 ntBASIC19.04■□□□□ 0.64
SMARCC2Q8TAQ2 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SMARCC2Q8TAQ2 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
SMARCC2Q8TAQ2 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SMARCC2Q8TAQ2 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SMARCC2Q8TAQ2 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SMARCC2Q8TAQ2 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SMARCC2Q8TAQ2 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC19.04■□□□□ 0.64
SMARCC2Q8TAQ2 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
SMARCC2Q8TAQ2 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
SMARCC2Q8TAQ2 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMARCC2Q8TAQ2 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMARCC2Q8TAQ2 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMARCC2Q8TAQ2 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMARCC2Q8TAQ2 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMARCC2Q8TAQ2 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMARCC2Q8TAQ2 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMARCC2Q8TAQ2 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMARCC2Q8TAQ2 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMARCC2Q8TAQ2 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC19.03■□□□□ 0.64
SMARCC2Q8TAQ2 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC19.03■□□□□ 0.64
SMARCC2Q8TAQ2 SPCS2P4-201ENST00000436160 681 ntBASIC19.03■□□□□ 0.64
SMARCC2Q8TAQ2 AC023141.5-201ENST00000458585 616 ntBASIC19.03■□□□□ 0.64
SMARCC2Q8TAQ2 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC19.03■□□□□ 0.64
SMARCC2Q8TAQ2 RNF34-208ENST00000555076 593 ntTSL 3 BASIC19.03■□□□□ 0.64
SMARCC2Q8TAQ2 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC19.03■□□□□ 0.64
SMARCC2Q8TAQ2 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SMARCC2Q8TAQ2 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SMARCC2Q8TAQ2 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMARCC2Q8TAQ2 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMARCC2Q8TAQ2 PAUPAR-201ENST00000630360 2965 ntBASIC19.03■□□□□ 0.64
SMARCC2Q8TAQ2 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC19.03■□□□□ 0.64
SMARCC2Q8TAQ2 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMARCC2Q8TAQ2 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMARCC2Q8TAQ2 GOLGA6L17P-202ENST00000614358 1398 ntBASIC19.03■□□□□ 0.64
SMARCC2Q8TAQ2 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC19.03■□□□□ 0.64
SMARCC2Q8TAQ2 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMARCC2Q8TAQ2 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC19.03■□□□□ 0.64
SMARCC2Q8TAQ2 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMARCC2Q8TAQ2 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
SMARCC2Q8TAQ2 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMARCC2Q8TAQ2 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMARCC2Q8TAQ2 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC19.03■□□□□ 0.64
SMARCC2Q8TAQ2 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
SMARCC2Q8TAQ2 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SMARCC2Q8TAQ2 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
SMARCC2Q8TAQ2 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC19.02■□□□□ 0.64
SMARCC2Q8TAQ2 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC19.02■□□□□ 0.64
SMARCC2Q8TAQ2 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC19.02■□□□□ 0.64
SMARCC2Q8TAQ2 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SMARCC2Q8TAQ2 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SMARCC2Q8TAQ2 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.64
SMARCC2Q8TAQ2 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SMARCC2Q8TAQ2 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SMARCC2Q8TAQ2 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
SMARCC2Q8TAQ2 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
SMARCC2Q8TAQ2 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
SMARCC2Q8TAQ2 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SMARCC2Q8TAQ2 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
SMARCC2Q8TAQ2 AL627223.1-201ENST00000416693 442 ntBASIC19.02■□□□□ 0.64
SMARCC2Q8TAQ2 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC19.02■□□□□ 0.64
SMARCC2Q8TAQ2 PMS2P2-201ENST00000425039 1128 ntBASIC19.02■□□□□ 0.64
SMARCC2Q8TAQ2 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC19.02■□□□□ 0.64
SMARCC2Q8TAQ2 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC19.02■□□□□ 0.64
SMARCC2Q8TAQ2 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC19.02■□□□□ 0.64
SMARCC2Q8TAQ2 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SMARCC2Q8TAQ2 INO80E-210ENST00000567705 880 ntTSL 3 BASIC19.02■□□□□ 0.64
SMARCC2Q8TAQ2 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC19.02■□□□□ 0.64
SMARCC2Q8TAQ2 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SMARCC2Q8TAQ2 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
SMARCC2Q8TAQ2 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SMARCC2Q8TAQ2 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SMARCC2Q8TAQ2 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SMARCC2Q8TAQ2 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SMARCC2Q8TAQ2 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC19.02■□□□□ 0.64
SMARCC2Q8TAQ2 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC19.02■□□□□ 0.63
SMARCC2Q8TAQ2 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC19.02■□□□□ 0.63
SMARCC2Q8TAQ2 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC19.02■□□□□ 0.63
SMARCC2Q8TAQ2 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SMARCC2Q8TAQ2 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
SMARCC2Q8TAQ2 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC19.01■□□□□ 0.63
SMARCC2Q8TAQ2 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC19.01■□□□□ 0.63
SMARCC2Q8TAQ2 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMARCC2Q8TAQ2 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SMARCC2Q8TAQ2 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMARCC2Q8TAQ2 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SMARCC2Q8TAQ2 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SMARCC2Q8TAQ2 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMARCC2Q8TAQ2 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC19.01■□□□□ 0.63
SMARCC2Q8TAQ2 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SMARCC2Q8TAQ2 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SMARCC2Q8TAQ2 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMARCC2Q8TAQ2 TSEN15P1-201ENST00000423257 515 ntBASIC19.01■□□□□ 0.63
SMARCC2Q8TAQ2 AC069335.1-201ENST00000489972 472 ntBASIC19.01■□□□□ 0.63
SMARCC2Q8TAQ2 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC19.01■□□□□ 0.63
SMARCC2Q8TAQ2 QPRT-203ENST00000562473 579 ntTSL 3 BASIC19.01■□□□□ 0.63
SMARCC2Q8TAQ2 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms