Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.35■□□□□ 0.37
LMO3Q8TAP4 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
LMO3Q8TAP4 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LMO3Q8TAP4 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.35■□□□□ 0.37
LMO3Q8TAP4 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC17.35■□□□□ 0.37
LMO3Q8TAP4 AC005237.2-201ENST00000434368 219 ntBASIC17.35■□□□□ 0.37
LMO3Q8TAP4 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC17.35■□□□□ 0.37
LMO3Q8TAP4 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LMO3Q8TAP4 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.35■□□□□ 0.37
LMO3Q8TAP4 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.35■□□□□ 0.37
LMO3Q8TAP4 ALG1L8P-201ENST00000533887 760 ntBASIC17.35■□□□□ 0.37
LMO3Q8TAP4 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.35■□□□□ 0.37
LMO3Q8TAP4 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.35■□□□□ 0.37
LMO3Q8TAP4 BANF1P1-201ENST00000553684 263 ntBASIC17.35■□□□□ 0.37
LMO3Q8TAP4 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LMO3Q8TAP4 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC17.35■□□□□ 0.37
LMO3Q8TAP4 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LMO3Q8TAP4 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LMO3Q8TAP4 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LMO3Q8TAP4 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LMO3Q8TAP4 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
LMO3Q8TAP4 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LMO3Q8TAP4 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
LMO3Q8TAP4 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.35■□□□□ 0.37
LMO3Q8TAP4 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LMO3Q8TAP4 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LMO3Q8TAP4 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LMO3Q8TAP4 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LMO3Q8TAP4 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC17.35■□□□□ 0.37
LMO3Q8TAP4 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
LMO3Q8TAP4 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LMO3Q8TAP4 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.35■□□□□ 0.37
LMO3Q8TAP4 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
LMO3Q8TAP4 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
LMO3Q8TAP4 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
LMO3Q8TAP4 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LMO3Q8TAP4 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.35■□□□□ 0.37
LMO3Q8TAP4 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LMO3Q8TAP4 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LMO3Q8TAP4 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC17.35■□□□□ 0.37
LMO3Q8TAP4 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
LMO3Q8TAP4 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LMO3Q8TAP4 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.34■□□□□ 0.37
LMO3Q8TAP4 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
LMO3Q8TAP4 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
LMO3Q8TAP4 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
LMO3Q8TAP4 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LMO3Q8TAP4 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LMO3Q8TAP4 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LMO3Q8TAP4 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LMO3Q8TAP4 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
LMO3Q8TAP4 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
LMO3Q8TAP4 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
LMO3Q8TAP4 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
LMO3Q8TAP4 ZBTB45P2-201ENST00000452245 1531 ntBASIC17.34■□□□□ 0.37
LMO3Q8TAP4 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
LMO3Q8TAP4 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.34■□□□□ 0.37
LMO3Q8TAP4 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC17.34■□□□□ 0.37
LMO3Q8TAP4 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.34■□□□□ 0.37
LMO3Q8TAP4 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC17.34■□□□□ 0.37
LMO3Q8TAP4 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC17.34■□□□□ 0.37
LMO3Q8TAP4 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.34■□□□□ 0.37
LMO3Q8TAP4 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
LMO3Q8TAP4 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LMO3Q8TAP4 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC17.34■□□□□ 0.37
LMO3Q8TAP4 METTL23-205ENST00000588302 925 ntTSL 5 BASIC17.34■□□□□ 0.37
LMO3Q8TAP4 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
LMO3Q8TAP4 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.34■□□□□ 0.37
LMO3Q8TAP4 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LMO3Q8TAP4 AC018892.3-201ENST00000623986 2499 ntBASIC17.34■□□□□ 0.37
LMO3Q8TAP4 PRAL-201ENST00000624952 3286 ntBASIC17.34■□□□□ 0.37
LMO3Q8TAP4 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.34■□□□□ 0.37
LMO3Q8TAP4 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.34■□□□□ 0.37
LMO3Q8TAP4 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LMO3Q8TAP4 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LMO3Q8TAP4 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
LMO3Q8TAP4 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC17.34■□□□□ 0.37
LMO3Q8TAP4 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
LMO3Q8TAP4 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
LMO3Q8TAP4 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
LMO3Q8TAP4 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.33■□□□□ 0.37
LMO3Q8TAP4 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LMO3Q8TAP4 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
LMO3Q8TAP4 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LMO3Q8TAP4 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC17.33■□□□□ 0.36
LMO3Q8TAP4 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.33■□□□□ 0.36
LMO3Q8TAP4 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LMO3Q8TAP4 AC092865.5-201ENST00000545435 363 ntBASIC17.33■□□□□ 0.36
LMO3Q8TAP4 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.33■□□□□ 0.36
LMO3Q8TAP4 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC17.33■□□□□ 0.36
LMO3Q8TAP4 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
LMO3Q8TAP4 AC243562.2-201ENST00000561247 970 ntBASIC17.33■□□□□ 0.36
LMO3Q8TAP4 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.33■□□□□ 0.36
LMO3Q8TAP4 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.33■□□□□ 0.36
LMO3Q8TAP4 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.33■□□□□ 0.36
LMO3Q8TAP4 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.33■□□□□ 0.36
LMO3Q8TAP4 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
LMO3Q8TAP4 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
LMO3Q8TAP4 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LMO3Q8TAP4 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms