Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC18.77■□□□□ 0.6
CCDC148Q8NFR7 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CCDC148Q8NFR7 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC18.77■□□□□ 0.6
CCDC148Q8NFR7 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
CCDC148Q8NFR7 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC148Q8NFR7 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
CCDC148Q8NFR7 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC18.77■□□□□ 0.6
CCDC148Q8NFR7 GOLGA6L17P-202ENST00000614358 1398 ntBASIC18.77■□□□□ 0.6
CCDC148Q8NFR7 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
CCDC148Q8NFR7 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC148Q8NFR7 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC18.76■□□□□ 0.59
CCDC148Q8NFR7 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC148Q8NFR7 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CCDC148Q8NFR7 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC148Q8NFR7 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CCDC148Q8NFR7 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC148Q8NFR7 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC148Q8NFR7 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC148Q8NFR7 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CCDC148Q8NFR7 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC148Q8NFR7 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC18.76■□□□□ 0.59
CCDC148Q8NFR7 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC18.76■□□□□ 0.59
CCDC148Q8NFR7 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC148Q8NFR7 AC245100.5-201ENST00000452108 331 ntBASIC18.76■□□□□ 0.59
CCDC148Q8NFR7 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC148Q8NFR7 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
CCDC148Q8NFR7 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC18.76■□□□□ 0.59
CCDC148Q8NFR7 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC18.76■□□□□ 0.59
CCDC148Q8NFR7 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC18.76■□□□□ 0.59
CCDC148Q8NFR7 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC18.76■□□□□ 0.59
CCDC148Q8NFR7 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC18.76■□□□□ 0.59
CCDC148Q8NFR7 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC148Q8NFR7 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC148Q8NFR7 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CCDC148Q8NFR7 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC148Q8NFR7 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC148Q8NFR7 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC148Q8NFR7 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC18.76■□□□□ 0.59
CCDC148Q8NFR7 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CCDC148Q8NFR7 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC148Q8NFR7 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
CCDC148Q8NFR7 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC18.76■□□□□ 0.59
CCDC148Q8NFR7 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC148Q8NFR7 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC18.76■□□□□ 0.59
CCDC148Q8NFR7 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC148Q8NFR7 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC18.76■□□□□ 0.59
CCDC148Q8NFR7 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
CCDC148Q8NFR7 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC148Q8NFR7 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC148Q8NFR7 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC148Q8NFR7 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC148Q8NFR7 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
CCDC148Q8NFR7 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CCDC148Q8NFR7 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC18.75■□□□□ 0.59
CCDC148Q8NFR7 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
CCDC148Q8NFR7 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC148Q8NFR7 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC148Q8NFR7 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC148Q8NFR7 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC18.75■□□□□ 0.59
CCDC148Q8NFR7 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC148Q8NFR7 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC148Q8NFR7 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC18.75■□□□□ 0.59
CCDC148Q8NFR7 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC18.75■□□□□ 0.59
CCDC148Q8NFR7 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC18.75■□□□□ 0.59
CCDC148Q8NFR7 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC18.75■□□□□ 0.59
CCDC148Q8NFR7 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC18.75■□□□□ 0.59
CCDC148Q8NFR7 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC18.75■□□□□ 0.59
CCDC148Q8NFR7 RNA5SP410-201ENST00000516285 106 ntBASIC18.75■□□□□ 0.59
CCDC148Q8NFR7 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC18.75■□□□□ 0.59
CCDC148Q8NFR7 AC006538.3-201ENST00000612495 578 ntBASIC18.75■□□□□ 0.59
CCDC148Q8NFR7 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC148Q8NFR7 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
CCDC148Q8NFR7 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC148Q8NFR7 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC148Q8NFR7 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC148Q8NFR7 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC18.75■□□□□ 0.59
CCDC148Q8NFR7 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC148Q8NFR7 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC18.75■□□□□ 0.59
CCDC148Q8NFR7 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC148Q8NFR7 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC148Q8NFR7 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CCDC148Q8NFR7 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC148Q8NFR7 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC148Q8NFR7 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC148Q8NFR7 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC18.75■□□□□ 0.59
CCDC148Q8NFR7 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC148Q8NFR7 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CCDC148Q8NFR7 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC148Q8NFR7 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC148Q8NFR7 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC148Q8NFR7 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CCDC148Q8NFR7 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC148Q8NFR7 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC148Q8NFR7 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CCDC148Q8NFR7 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC148Q8NFR7 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC148Q8NFR7 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC148Q8NFR7 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC148Q8NFR7 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC148Q8NFR7 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms