Protein–RNA interactions for Protein: Q8NCS4

TMEM35B, Transmembrane protein 35B, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35BQ8NCS4 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM35BQ8NCS4 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.24■□□□□ 0.35
TMEM35BQ8NCS4 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.24■□□□□ 0.35
TMEM35BQ8NCS4 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM35BQ8NCS4 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC17.24■□□□□ 0.35
TMEM35BQ8NCS4 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
TMEM35BQ8NCS4 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.24■□□□□ 0.35
TMEM35BQ8NCS4 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
TMEM35BQ8NCS4 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.24■□□□□ 0.35
TMEM35BQ8NCS4 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM35BQ8NCS4 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM35BQ8NCS4 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.24■□□□□ 0.35
TMEM35BQ8NCS4 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.24■□□□□ 0.35
TMEM35BQ8NCS4 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TMEM35BQ8NCS4 CEND1P1-201ENST00000451006 455 ntBASIC17.24■□□□□ 0.35
TMEM35BQ8NCS4 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.24■□□□□ 0.35
TMEM35BQ8NCS4 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.24■□□□□ 0.35
TMEM35BQ8NCS4 IGHV3-62-201ENST00000520057 340 ntBASIC17.24■□□□□ 0.35
TMEM35BQ8NCS4 KRT8P23-201ENST00000560090 1207 ntBASIC17.24■□□□□ 0.35
TMEM35BQ8NCS4 LINC01225-203ENST00000563550 1244 ntBASIC17.24■□□□□ 0.35
TMEM35BQ8NCS4 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.24■□□□□ 0.35
TMEM35BQ8NCS4 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM35BQ8NCS4 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.24■□□□□ 0.35
TMEM35BQ8NCS4 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.24■□□□□ 0.35
TMEM35BQ8NCS4 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.24■□□□□ 0.35
TMEM35BQ8NCS4 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM35BQ8NCS4 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.24■□□□□ 0.35
TMEM35BQ8NCS4 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM35BQ8NCS4 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM35BQ8NCS4 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM35BQ8NCS4 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM35BQ8NCS4 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM35BQ8NCS4 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM35BQ8NCS4 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM35BQ8NCS4 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.24■□□□□ 0.35
TMEM35BQ8NCS4 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.24■□□□□ 0.35
TMEM35BQ8NCS4 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TMEM35BQ8NCS4 CDC14C-201ENST00000428251 1719 ntBASIC17.24■□□□□ 0.35
TMEM35BQ8NCS4 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM35BQ8NCS4 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.24■□□□□ 0.35
TMEM35BQ8NCS4 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.23■□□□□ 0.35
TMEM35BQ8NCS4 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM35BQ8NCS4 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM35BQ8NCS4 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM35BQ8NCS4 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM35BQ8NCS4 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.23■□□□□ 0.35
TMEM35BQ8NCS4 LINC02447-202ENST00000501888 2146 ntBASIC17.23■□□□□ 0.35
TMEM35BQ8NCS4 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM35BQ8NCS4 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM35BQ8NCS4 FOXO1B-201ENST00000504678 1527 ntBASIC17.23■□□□□ 0.35
TMEM35BQ8NCS4 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.23■□□□□ 0.35
TMEM35BQ8NCS4 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
TMEM35BQ8NCS4 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.23■□□□□ 0.35
TMEM35BQ8NCS4 HAUS4P1-201ENST00000406739 1145 ntBASIC17.23■□□□□ 0.35
TMEM35BQ8NCS4 AC142381.1-201ENST00000426099 345 ntBASIC17.23■□□□□ 0.35
TMEM35BQ8NCS4 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.23■□□□□ 0.35
TMEM35BQ8NCS4 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.23■□□□□ 0.35
TMEM35BQ8NCS4 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
TMEM35BQ8NCS4 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.23■□□□□ 0.35
TMEM35BQ8NCS4 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.23■□□□□ 0.35
TMEM35BQ8NCS4 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.23■□□□□ 0.35
TMEM35BQ8NCS4 MIR3687-2-201ENST00000577708 61 ntBASIC17.23■□□□□ 0.35
TMEM35BQ8NCS4 MIR3687-1-201ENST00000614492 61 ntBASIC17.23■□□□□ 0.35
TMEM35BQ8NCS4 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
TMEM35BQ8NCS4 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM35BQ8NCS4 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.23■□□□□ 0.35
TMEM35BQ8NCS4 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TMEM35BQ8NCS4 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM35BQ8NCS4 AC069224.1-201ENST00000566372 1715 ntBASIC17.23■□□□□ 0.35
TMEM35BQ8NCS4 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM35BQ8NCS4 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.23■□□□□ 0.35
TMEM35BQ8NCS4 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TMEM35BQ8NCS4 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM35BQ8NCS4 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM35BQ8NCS4 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM35BQ8NCS4 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TMEM35BQ8NCS4 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM35BQ8NCS4 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.23■□□□□ 0.35
TMEM35BQ8NCS4 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.23■□□□□ 0.35
TMEM35BQ8NCS4 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM35BQ8NCS4 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM35BQ8NCS4 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
TMEM35BQ8NCS4 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM35BQ8NCS4 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM35BQ8NCS4 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC17.22■□□□□ 0.35
TMEM35BQ8NCS4 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM35BQ8NCS4 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM35BQ8NCS4 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM35BQ8NCS4 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.22■□□□□ 0.35
TMEM35BQ8NCS4 AC008894.3-201ENST00000624324 3103 ntBASIC17.22■□□□□ 0.35
TMEM35BQ8NCS4 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM35BQ8NCS4 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC17.22■□□□□ 0.35
TMEM35BQ8NCS4 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM35BQ8NCS4 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM35BQ8NCS4 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.22■□□□□ 0.35
TMEM35BQ8NCS4 MIR346-201ENST00000362234 95 ntBASIC17.22■□□□□ 0.35
TMEM35BQ8NCS4 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.22■□□□□ 0.35
TMEM35BQ8NCS4 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM35BQ8NCS4 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM35BQ8NCS4 BX842568.4-201ENST00000421222 227 ntBASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms