Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZIC4Q8N9L1 AC092183.1-201ENST00000469884 875 ntBASIC14.36□□□□□ -0.11
ZIC4Q8N9L1 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.36□□□□□ -0.11
ZIC4Q8N9L1 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.36□□□□□ -0.11
ZIC4Q8N9L1 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.36□□□□□ -0.11
ZIC4Q8N9L1 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
ZIC4Q8N9L1 AC004449.1-201ENST00000564240 433 ntBASIC14.36□□□□□ -0.11
ZIC4Q8N9L1 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.36□□□□□ -0.11
ZIC4Q8N9L1 AC003101.2-201ENST00000612557 442 ntBASIC14.36□□□□□ -0.11
ZIC4Q8N9L1 AC007967.4-201ENST00000614700 386 ntBASIC14.36□□□□□ -0.11
ZIC4Q8N9L1 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC14.36□□□□□ -0.11
ZIC4Q8N9L1 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.36□□□□□ -0.11
ZIC4Q8N9L1 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
ZIC4Q8N9L1 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZIC4Q8N9L1 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC14.36□□□□□ -0.11
ZIC4Q8N9L1 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
ZIC4Q8N9L1 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZIC4Q8N9L1 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
ZIC4Q8N9L1 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.35□□□□□ -0.11
ZIC4Q8N9L1 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.35□□□□□ -0.11
ZIC4Q8N9L1 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZIC4Q8N9L1 CDC14C-201ENST00000428251 1719 ntBASIC14.35□□□□□ -0.11
ZIC4Q8N9L1 AC069224.1-201ENST00000566372 1715 ntBASIC14.35□□□□□ -0.11
ZIC4Q8N9L1 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ZIC4Q8N9L1 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ZIC4Q8N9L1 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.35□□□□□ -0.11
ZIC4Q8N9L1 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZIC4Q8N9L1 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZIC4Q8N9L1 AL691432.1-201ENST00000596308 1422 ntBASIC14.35□□□□□ -0.11
ZIC4Q8N9L1 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZIC4Q8N9L1 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ZIC4Q8N9L1 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZIC4Q8N9L1 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ZIC4Q8N9L1 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZIC4Q8N9L1 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ZIC4Q8N9L1 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
ZIC4Q8N9L1 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZIC4Q8N9L1 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ZIC4Q8N9L1 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.35□□□□□ -0.11
ZIC4Q8N9L1 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ZIC4Q8N9L1 SPDYE7P-202ENST00000420373 878 ntBASIC14.35□□□□□ -0.11
ZIC4Q8N9L1 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.35□□□□□ -0.11
ZIC4Q8N9L1 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.35□□□□□ -0.11
ZIC4Q8N9L1 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.35□□□□□ -0.11
ZIC4Q8N9L1 AC025678.2-201ENST00000562061 970 ntBASIC14.35□□□□□ -0.11
ZIC4Q8N9L1 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.35□□□□□ -0.11
ZIC4Q8N9L1 AC105021.1-202ENST00000570572 669 ntBASIC14.35□□□□□ -0.11
ZIC4Q8N9L1 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.35□□□□□ -0.11
ZIC4Q8N9L1 MIR6080-201ENST00000617359 66 ntBASIC14.35□□□□□ -0.11
ZIC4Q8N9L1 AC093028.1-201ENST00000622998 982 ntBASIC14.35□□□□□ -0.11
ZIC4Q8N9L1 Z92544.3-201ENST00000624747 417 ntBASIC14.35□□□□□ -0.11
ZIC4Q8N9L1 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
ZIC4Q8N9L1 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.35□□□□□ -0.11
ZIC4Q8N9L1 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.35□□□□□ -0.11
ZIC4Q8N9L1 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ZIC4Q8N9L1 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.35□□□□□ -0.11
ZIC4Q8N9L1 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZIC4Q8N9L1 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.35□□□□□ -0.11
ZIC4Q8N9L1 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZIC4Q8N9L1 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ZIC4Q8N9L1 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.35□□□□□ -0.11
ZIC4Q8N9L1 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ZIC4Q8N9L1 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZIC4Q8N9L1 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZIC4Q8N9L1 AL136982.4-201ENST00000437689 1740 ntBASIC14.35□□□□□ -0.11
ZIC4Q8N9L1 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC14.35□□□□□ -0.11
ZIC4Q8N9L1 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.34□□□□□ -0.11
ZIC4Q8N9L1 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZIC4Q8N9L1 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ZIC4Q8N9L1 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC14.34□□□□□ -0.11
ZIC4Q8N9L1 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZIC4Q8N9L1 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ZIC4Q8N9L1 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
ZIC4Q8N9L1 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.34□□□□□ -0.11
ZIC4Q8N9L1 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZIC4Q8N9L1 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZIC4Q8N9L1 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZIC4Q8N9L1 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZIC4Q8N9L1 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZIC4Q8N9L1 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.34□□□□□ -0.11
ZIC4Q8N9L1 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZIC4Q8N9L1 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.34□□□□□ -0.11
ZIC4Q8N9L1 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ZIC4Q8N9L1 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
ZIC4Q8N9L1 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.34□□□□□ -0.11
ZIC4Q8N9L1 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
ZIC4Q8N9L1 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZIC4Q8N9L1 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZIC4Q8N9L1 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZIC4Q8N9L1 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.34□□□□□ -0.11
ZIC4Q8N9L1 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZIC4Q8N9L1 AL353705.2-201ENST00000428243 662 ntBASIC14.34□□□□□ -0.11
ZIC4Q8N9L1 METTL21AP1-201ENST00000438852 635 ntBASIC14.34□□□□□ -0.11
ZIC4Q8N9L1 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZIC4Q8N9L1 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC14.34□□□□□ -0.11
ZIC4Q8N9L1 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ZIC4Q8N9L1 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
ZIC4Q8N9L1 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.34□□□□□ -0.11
ZIC4Q8N9L1 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC14.34□□□□□ -0.11
ZIC4Q8N9L1 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms