Protein–RNA interactions for Protein: Q8N328

PGBD3, PiggyBac transposable element-derived protein 3, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD3Q8N328 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PGBD3Q8N328 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.51■□□□□ 0.23
PGBD3Q8N328 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PGBD3Q8N328 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PGBD3Q8N328 AL353779.1-201ENST00000434793 351 ntBASIC16.51■□□□□ 0.23
PGBD3Q8N328 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC16.51■□□□□ 0.23
PGBD3Q8N328 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.51■□□□□ 0.23
PGBD3Q8N328 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
PGBD3Q8N328 TP53TG3HP-202ENST00000569755 579 ntBASIC16.51■□□□□ 0.23
PGBD3Q8N328 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PGBD3Q8N328 AL359881.2-201ENST00000602973 570 ntBASIC16.51■□□□□ 0.23
PGBD3Q8N328 AL844908.2-201ENST00000609461 460 ntBASIC16.51■□□□□ 0.23
PGBD3Q8N328 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.51■□□□□ 0.23
PGBD3Q8N328 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.51■□□□□ 0.23
PGBD3Q8N328 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.51■□□□□ 0.23
PGBD3Q8N328 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.51■□□□□ 0.23
PGBD3Q8N328 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
PGBD3Q8N328 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
PGBD3Q8N328 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PGBD3Q8N328 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
PGBD3Q8N328 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PGBD3Q8N328 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PGBD3Q8N328 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PGBD3Q8N328 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PGBD3Q8N328 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.51■□□□□ 0.23
PGBD3Q8N328 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PGBD3Q8N328 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
PGBD3Q8N328 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PGBD3Q8N328 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PGBD3Q8N328 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PGBD3Q8N328 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PGBD3Q8N328 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.5■□□□□ 0.23
PGBD3Q8N328 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PGBD3Q8N328 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PGBD3Q8N328 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PGBD3Q8N328 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.5■□□□□ 0.23
PGBD3Q8N328 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PGBD3Q8N328 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
PGBD3Q8N328 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.5■□□□□ 0.23
PGBD3Q8N328 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
PGBD3Q8N328 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PGBD3Q8N328 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
PGBD3Q8N328 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
PGBD3Q8N328 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PGBD3Q8N328 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PGBD3Q8N328 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PGBD3Q8N328 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.5■□□□□ 0.23
PGBD3Q8N328 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.5■□□□□ 0.23
PGBD3Q8N328 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.5■□□□□ 0.23
PGBD3Q8N328 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PGBD3Q8N328 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.5■□□□□ 0.23
PGBD3Q8N328 GNAQP1-201ENST00000444815 1067 ntBASIC16.5■□□□□ 0.23
PGBD3Q8N328 RN7SL618P-201ENST00000477850 296 ntBASIC16.5■□□□□ 0.23
PGBD3Q8N328 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.5■□□□□ 0.23
PGBD3Q8N328 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC16.5■□□□□ 0.23
PGBD3Q8N328 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC16.5■□□□□ 0.23
PGBD3Q8N328 AC140912.1-201ENST00000577171 1054 ntBASIC16.5■□□□□ 0.23
PGBD3Q8N328 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC16.5■□□□□ 0.23
PGBD3Q8N328 AC004840.1-201ENST00000636359 365 ntBASIC16.5■□□□□ 0.23
PGBD3Q8N328 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PGBD3Q8N328 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
PGBD3Q8N328 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
PGBD3Q8N328 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PGBD3Q8N328 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PGBD3Q8N328 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
PGBD3Q8N328 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
PGBD3Q8N328 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
PGBD3Q8N328 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PGBD3Q8N328 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PGBD3Q8N328 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.49■□□□□ 0.23
PGBD3Q8N328 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PGBD3Q8N328 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PGBD3Q8N328 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PGBD3Q8N328 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PGBD3Q8N328 AC138969.3-201ENST00000546612 1459 ntBASIC16.49■□□□□ 0.23
PGBD3Q8N328 AC138932.2-201ENST00000548268 1459 ntBASIC16.49■□□□□ 0.23
PGBD3Q8N328 AC126755.4-201ENST00000549796 1459 ntBASIC16.49■□□□□ 0.23
PGBD3Q8N328 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.49■□□□□ 0.23
PGBD3Q8N328 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PGBD3Q8N328 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PGBD3Q8N328 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PGBD3Q8N328 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PGBD3Q8N328 PCDHB17P-201ENST00000539533 2393 ntBASIC16.49■□□□□ 0.23
PGBD3Q8N328 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
PGBD3Q8N328 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PGBD3Q8N328 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PGBD3Q8N328 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
PGBD3Q8N328 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.49■□□□□ 0.23
PGBD3Q8N328 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
PGBD3Q8N328 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PGBD3Q8N328 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PGBD3Q8N328 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.49■□□□□ 0.23
PGBD3Q8N328 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
PGBD3Q8N328 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.49■□□□□ 0.23
PGBD3Q8N328 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.49■□□□□ 0.23
PGBD3Q8N328 NAA50-208ENST00000497255 789 ntTSL 5 BASIC16.49■□□□□ 0.23
PGBD3Q8N328 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC16.49■□□□□ 0.23
PGBD3Q8N328 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.49■□□□□ 0.23
PGBD3Q8N328 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
PGBD3Q8N328 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms