Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC65Q8IXS2 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC18.08■□□□□ 0.48
CCDC65Q8IXS2 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC65Q8IXS2 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC65Q8IXS2 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
CCDC65Q8IXS2 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC18.08■□□□□ 0.48
CCDC65Q8IXS2 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC18.08■□□□□ 0.48
CCDC65Q8IXS2 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC65Q8IXS2 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC18.08■□□□□ 0.48
CCDC65Q8IXS2 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC18.08■□□□□ 0.48
CCDC65Q8IXS2 ELL2P1-201ENST00000413990 1906 ntBASIC18.08■□□□□ 0.48
CCDC65Q8IXS2 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CCDC65Q8IXS2 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC65Q8IXS2 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC18.07■□□□□ 0.48
CCDC65Q8IXS2 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC65Q8IXS2 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC65Q8IXS2 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC65Q8IXS2 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC65Q8IXS2 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC65Q8IXS2 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC65Q8IXS2 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC65Q8IXS2 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC18.07■□□□□ 0.48
CCDC65Q8IXS2 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC18.07■□□□□ 0.48
CCDC65Q8IXS2 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CCDC65Q8IXS2 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC18.07■□□□□ 0.48
CCDC65Q8IXS2 SPCS2P4-201ENST00000436160 681 ntBASIC18.07■□□□□ 0.48
CCDC65Q8IXS2 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC18.07■□□□□ 0.48
CCDC65Q8IXS2 AC245100.5-201ENST00000452108 331 ntBASIC18.07■□□□□ 0.48
CCDC65Q8IXS2 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC18.07■□□□□ 0.48
CCDC65Q8IXS2 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC18.07■□□□□ 0.48
CCDC65Q8IXS2 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC18.07■□□□□ 0.48
CCDC65Q8IXS2 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC18.07■□□□□ 0.48
CCDC65Q8IXS2 RNF34-208ENST00000555076 593 ntTSL 3 BASIC18.07■□□□□ 0.48
CCDC65Q8IXS2 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC18.07■□□□□ 0.48
CCDC65Q8IXS2 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC18.07■□□□□ 0.48
CCDC65Q8IXS2 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC18.07■□□□□ 0.48
CCDC65Q8IXS2 MIR4321-201ENST00000592276 80 ntBASIC18.07■□□□□ 0.48
CCDC65Q8IXS2 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC18.07■□□□□ 0.48
CCDC65Q8IXS2 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC65Q8IXS2 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC18.07■□□□□ 0.48
CCDC65Q8IXS2 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CCDC65Q8IXS2 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC18.07■□□□□ 0.48
CCDC65Q8IXS2 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC65Q8IXS2 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC18.07■□□□□ 0.48
CCDC65Q8IXS2 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CCDC65Q8IXS2 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
CCDC65Q8IXS2 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CCDC65Q8IXS2 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC65Q8IXS2 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
CCDC65Q8IXS2 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC65Q8IXS2 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC65Q8IXS2 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC18.06■□□□□ 0.48
CCDC65Q8IXS2 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC65Q8IXS2 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC65Q8IXS2 AC022188.1-201ENST00000620960 1664 ntBASIC18.06■□□□□ 0.48
CCDC65Q8IXS2 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
CCDC65Q8IXS2 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC65Q8IXS2 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC65Q8IXS2 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CCDC65Q8IXS2 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC18.06■□□□□ 0.48
CCDC65Q8IXS2 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC65Q8IXS2 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC65Q8IXS2 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC18.06■□□□□ 0.48
CCDC65Q8IXS2 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC65Q8IXS2 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC18.06■□□□□ 0.48
CCDC65Q8IXS2 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CCDC65Q8IXS2 CEND1P1-201ENST00000451006 455 ntBASIC18.06■□□□□ 0.48
CCDC65Q8IXS2 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
CCDC65Q8IXS2 IGHV3-62-201ENST00000520057 340 ntBASIC18.06■□□□□ 0.48
CCDC65Q8IXS2 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC18.06■□□□□ 0.48
CCDC65Q8IXS2 MIR3687-2-201ENST00000577708 61 ntBASIC18.06■□□□□ 0.48
CCDC65Q8IXS2 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC18.06■□□□□ 0.48
CCDC65Q8IXS2 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC18.06■□□□□ 0.48
CCDC65Q8IXS2 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC18.06■□□□□ 0.48
CCDC65Q8IXS2 MIR3687-1-201ENST00000614492 61 ntBASIC18.06■□□□□ 0.48
CCDC65Q8IXS2 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC18.06■□□□□ 0.48
CCDC65Q8IXS2 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC65Q8IXS2 AL365203.3-201ENST00000609742 2057 ntBASIC18.06■□□□□ 0.48
CCDC65Q8IXS2 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC65Q8IXS2 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC65Q8IXS2 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC18.06■□□□□ 0.48
CCDC65Q8IXS2 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC65Q8IXS2 LINC02199-201ENST00000506655 2702 ntBASIC18.06■□□□□ 0.48
CCDC65Q8IXS2 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC65Q8IXS2 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC18.06■□□□□ 0.48
CCDC65Q8IXS2 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CCDC65Q8IXS2 GOLGA2P9-201ENST00000596977 1937 ntBASIC18.06■□□□□ 0.48
CCDC65Q8IXS2 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC18.06■□□□□ 0.48
CCDC65Q8IXS2 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CCDC65Q8IXS2 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC65Q8IXS2 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CCDC65Q8IXS2 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC65Q8IXS2 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CCDC65Q8IXS2 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC65Q8IXS2 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC65Q8IXS2 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC65Q8IXS2 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC18.05■□□□□ 0.48
CCDC65Q8IXS2 FOXO1B-201ENST00000504678 1527 ntBASIC18.05■□□□□ 0.48
CCDC65Q8IXS2 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC18.05■□□□□ 0.48
CCDC65Q8IXS2 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms