Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC71Q8IV32 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
CCDC71Q8IV32 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.31■□□□□ 0.04
CCDC71Q8IV32 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
CCDC71Q8IV32 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC71Q8IV32 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC71Q8IV32 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
CCDC71Q8IV32 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC71Q8IV32 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC15.31■□□□□ 0.04
CCDC71Q8IV32 RHOQP3-201ENST00000437982 621 ntBASIC15.31■□□□□ 0.04
CCDC71Q8IV32 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC15.31■□□□□ 0.04
CCDC71Q8IV32 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC71Q8IV32 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.31■□□□□ 0.04
CCDC71Q8IV32 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.31■□□□□ 0.04
CCDC71Q8IV32 AC023141.13-201ENST00000604991 943 ntBASIC15.31■□□□□ 0.04
CCDC71Q8IV32 AC106028.4-201ENST00000614509 607 ntBASIC15.31■□□□□ 0.04
CCDC71Q8IV32 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.31■□□□□ 0.04
CCDC71Q8IV32 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CCDC71Q8IV32 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC71Q8IV32 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC71Q8IV32 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
CCDC71Q8IV32 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.31■□□□□ 0.04
CCDC71Q8IV32 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC71Q8IV32 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC71Q8IV32 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.31■□□□□ 0.04
CCDC71Q8IV32 AC022532.1-201ENST00000624563 1728 ntBASIC15.31■□□□□ 0.04
CCDC71Q8IV32 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.31■□□□□ 0.04
CCDC71Q8IV32 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC71Q8IV32 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC71Q8IV32 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CCDC71Q8IV32 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CCDC71Q8IV32 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
CCDC71Q8IV32 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CCDC71Q8IV32 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC71Q8IV32 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.31■□□□□ 0.04
CCDC71Q8IV32 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
CCDC71Q8IV32 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CCDC71Q8IV32 TNRC18P2-201ENST00000417666 2714 ntBASIC15.3■□□□□ 0.04
CCDC71Q8IV32 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.3■□□□□ 0.04
CCDC71Q8IV32 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC71Q8IV32 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
CCDC71Q8IV32 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CCDC71Q8IV32 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC71Q8IV32 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC71Q8IV32 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC71Q8IV32 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC71Q8IV32 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC71Q8IV32 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC71Q8IV32 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC71Q8IV32 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC71Q8IV32 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC71Q8IV32 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC71Q8IV32 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.3■□□□□ 0.04
CCDC71Q8IV32 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC71Q8IV32 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC71Q8IV32 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC15.3■□□□□ 0.04
CCDC71Q8IV32 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC71Q8IV32 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.3■□□□□ 0.04
CCDC71Q8IV32 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.3■□□□□ 0.04
CCDC71Q8IV32 AL645939.2-201ENST00000427340 991 ntBASIC15.3■□□□□ 0.04
CCDC71Q8IV32 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC71Q8IV32 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.3■□□□□ 0.04
CCDC71Q8IV32 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CCDC71Q8IV32 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC71Q8IV32 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC71Q8IV32 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC15.3■□□□□ 0.04
CCDC71Q8IV32 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC71Q8IV32 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CCDC71Q8IV32 KRT8P49-201ENST00000604166 1432 ntBASIC15.3■□□□□ 0.04
CCDC71Q8IV32 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC15.3■□□□□ 0.04
CCDC71Q8IV32 AL021920.2-201ENST00000624828 1351 ntBASIC15.3■□□□□ 0.04
CCDC71Q8IV32 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC15.3■□□□□ 0.04
CCDC71Q8IV32 AC007064.4-201ENST00000637740 555 ntBASIC15.3■□□□□ 0.04
CCDC71Q8IV32 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.3■□□□□ 0.04
CCDC71Q8IV32 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CCDC71Q8IV32 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC71Q8IV32 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CCDC71Q8IV32 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CCDC71Q8IV32 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC71Q8IV32 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CCDC71Q8IV32 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC71Q8IV32 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC71Q8IV32 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC71Q8IV32 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.29■□□□□ 0.04
CCDC71Q8IV32 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC71Q8IV32 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC71Q8IV32 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC71Q8IV32 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC71Q8IV32 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CCDC71Q8IV32 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC71Q8IV32 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC71Q8IV32 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC71Q8IV32 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.29■□□□□ 0.04
CCDC71Q8IV32 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC71Q8IV32 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC71Q8IV32 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CCDC71Q8IV32 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC71Q8IV32 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CCDC71Q8IV32 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC71Q8IV32 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms