Protein–RNA interactions for Protein: Q86TM6

SYVN1, E3 ubiquitin-protein ligase synoviolin, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1Q86TM6 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SYVN1Q86TM6 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.04■□□□□ 0.16
SYVN1Q86TM6 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.04■□□□□ 0.16
SYVN1Q86TM6 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SYVN1Q86TM6 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SYVN1Q86TM6 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
SYVN1Q86TM6 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
SYVN1Q86TM6 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SYVN1Q86TM6 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SYVN1Q86TM6 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SYVN1Q86TM6 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SYVN1Q86TM6 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SYVN1Q86TM6 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
SYVN1Q86TM6 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SYVN1Q86TM6 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.03■□□□□ 0.16
SYVN1Q86TM6 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.03■□□□□ 0.16
SYVN1Q86TM6 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SYVN1Q86TM6 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SYVN1Q86TM6 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.03■□□□□ 0.16
SYVN1Q86TM6 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SYVN1Q86TM6 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SYVN1Q86TM6 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SYVN1Q86TM6 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SYVN1Q86TM6 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SYVN1Q86TM6 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.03■□□□□ 0.16
SYVN1Q86TM6 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.03■□□□□ 0.16
SYVN1Q86TM6 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
SYVN1Q86TM6 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
SYVN1Q86TM6 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
SYVN1Q86TM6 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SYVN1Q86TM6 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.03■□□□□ 0.16
SYVN1Q86TM6 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.03■□□□□ 0.16
SYVN1Q86TM6 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.03■□□□□ 0.16
SYVN1Q86TM6 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.03■□□□□ 0.16
SYVN1Q86TM6 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.03■□□□□ 0.16
SYVN1Q86TM6 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SYVN1Q86TM6 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SYVN1Q86TM6 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SYVN1Q86TM6 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
SYVN1Q86TM6 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
SYVN1Q86TM6 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
SYVN1Q86TM6 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
SYVN1Q86TM6 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.03■□□□□ 0.16
SYVN1Q86TM6 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.03■□□□□ 0.16
SYVN1Q86TM6 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SYVN1Q86TM6 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.03■□□□□ 0.16
SYVN1Q86TM6 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SYVN1Q86TM6 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SYVN1Q86TM6 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SYVN1Q86TM6 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SYVN1Q86TM6 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.02■□□□□ 0.16
SYVN1Q86TM6 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
SYVN1Q86TM6 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
SYVN1Q86TM6 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.02■□□□□ 0.16
SYVN1Q86TM6 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.02■□□□□ 0.16
SYVN1Q86TM6 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.02■□□□□ 0.16
SYVN1Q86TM6 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SYVN1Q86TM6 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.02■□□□□ 0.16
SYVN1Q86TM6 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
SYVN1Q86TM6 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.02■□□□□ 0.16
SYVN1Q86TM6 MST1L-201ENST00000442552 2185 ntBASIC16.02■□□□□ 0.16
SYVN1Q86TM6 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SYVN1Q86TM6 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.02■□□□□ 0.16
SYVN1Q86TM6 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.02■□□□□ 0.16
SYVN1Q86TM6 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.02■□□□□ 0.16
SYVN1Q86TM6 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.02■□□□□ 0.16
SYVN1Q86TM6 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
SYVN1Q86TM6 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.02■□□□□ 0.16
SYVN1Q86TM6 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.02■□□□□ 0.16
SYVN1Q86TM6 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.02■□□□□ 0.16
SYVN1Q86TM6 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.02■□□□□ 0.16
SYVN1Q86TM6 AC105339.1-204ENST00000636249 355 ntBASIC16.02■□□□□ 0.16
SYVN1Q86TM6 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
SYVN1Q86TM6 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
SYVN1Q86TM6 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SYVN1Q86TM6 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SYVN1Q86TM6 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
SYVN1Q86TM6 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.02■□□□□ 0.15
SYVN1Q86TM6 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
SYVN1Q86TM6 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SYVN1Q86TM6 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SYVN1Q86TM6 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SYVN1Q86TM6 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
SYVN1Q86TM6 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SYVN1Q86TM6 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
SYVN1Q86TM6 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.02■□□□□ 0.15
SYVN1Q86TM6 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.02■□□□□ 0.15
SYVN1Q86TM6 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SYVN1Q86TM6 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SYVN1Q86TM6 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SYVN1Q86TM6 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SYVN1Q86TM6 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SYVN1Q86TM6 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SYVN1Q86TM6 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
SYVN1Q86TM6 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SYVN1Q86TM6 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.01■□□□□ 0.15
SYVN1Q86TM6 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
SYVN1Q86TM6 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SYVN1Q86TM6 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
SYVN1Q86TM6 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms