Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CHMP1BQ7LBR1 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHMP1BQ7LBR1 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHMP1BQ7LBR1 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHMP1BQ7LBR1 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHMP1BQ7LBR1 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHMP1BQ7LBR1 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHMP1BQ7LBR1 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.11■□□□□ 0.01
CHMP1BQ7LBR1 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CHMP1BQ7LBR1 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CHMP1BQ7LBR1 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC15.11■□□□□ 0.01
CHMP1BQ7LBR1 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.11■□□□□ 0.01
CHMP1BQ7LBR1 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.11■□□□□ 0.01
CHMP1BQ7LBR1 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC15.11■□□□□ 0.01
CHMP1BQ7LBR1 AC091812.2-201ENST00000619081 385 ntBASIC15.11■□□□□ 0.01
CHMP1BQ7LBR1 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
CHMP1BQ7LBR1 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHMP1BQ7LBR1 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CHMP1BQ7LBR1 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHMP1BQ7LBR1 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.11■□□□□ 0.01
CHMP1BQ7LBR1 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CHMP1BQ7LBR1 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CHMP1BQ7LBR1 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHMP1BQ7LBR1 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHMP1BQ7LBR1 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CHMP1BQ7LBR1 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
CHMP1BQ7LBR1 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.11■□□□□ 0.01
CHMP1BQ7LBR1 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHMP1BQ7LBR1 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHMP1BQ7LBR1 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHMP1BQ7LBR1 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CHMP1BQ7LBR1 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CHMP1BQ7LBR1 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHMP1BQ7LBR1 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CHMP1BQ7LBR1 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHMP1BQ7LBR1 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CHMP1BQ7LBR1 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHMP1BQ7LBR1 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.1■□□□□ 0.01
CHMP1BQ7LBR1 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHMP1BQ7LBR1 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CHMP1BQ7LBR1 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHMP1BQ7LBR1 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHMP1BQ7LBR1 AC131009.4-201ENST00000624048 1740 ntBASIC15.1■□□□□ 0.01
CHMP1BQ7LBR1 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHMP1BQ7LBR1 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHMP1BQ7LBR1 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHMP1BQ7LBR1 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHMP1BQ7LBR1 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHMP1BQ7LBR1 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC15.1■□□□□ 0.01
CHMP1BQ7LBR1 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC15.1■□□□□ 0.01
CHMP1BQ7LBR1 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.1■□□□□ 0.01
CHMP1BQ7LBR1 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.1■□□□□ 0.01
CHMP1BQ7LBR1 ALG1L5P-201ENST00000482043 771 ntBASIC15.1■□□□□ 0.01
CHMP1BQ7LBR1 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CHMP1BQ7LBR1 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC15.1■□□□□ 0.01
CHMP1BQ7LBR1 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC15.1■□□□□ 0.01
CHMP1BQ7LBR1 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
CHMP1BQ7LBR1 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.1■□□□□ 0.01
CHMP1BQ7LBR1 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.1■□□□□ 0.01
CHMP1BQ7LBR1 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.1■□□□□ 0.01
CHMP1BQ7LBR1 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.1■□□□□ 0.01
CHMP1BQ7LBR1 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC15.1■□□□□ 0.01
CHMP1BQ7LBR1 AC055717.3-201ENST00000622967 595 ntBASIC15.1■□□□□ 0.01
CHMP1BQ7LBR1 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CHMP1BQ7LBR1 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHMP1BQ7LBR1 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHMP1BQ7LBR1 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CHMP1BQ7LBR1 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CHMP1BQ7LBR1 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHMP1BQ7LBR1 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHMP1BQ7LBR1 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CHMP1BQ7LBR1 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CHMP1BQ7LBR1 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHMP1BQ7LBR1 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHMP1BQ7LBR1 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.1■□□□□ 0.01
CHMP1BQ7LBR1 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.1■□□□□ 0.01
CHMP1BQ7LBR1 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CHMP1BQ7LBR1 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.1■□□□□ 0.01
CHMP1BQ7LBR1 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHMP1BQ7LBR1 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHMP1BQ7LBR1 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.1■□□□□ 0.01
CHMP1BQ7LBR1 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.1■□□□□ 0.01
CHMP1BQ7LBR1 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CHMP1BQ7LBR1 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CHMP1BQ7LBR1 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CHMP1BQ7LBR1 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CHMP1BQ7LBR1 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.09■□□□□ 0.01
CHMP1BQ7LBR1 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.09■□□□□ 0.01
CHMP1BQ7LBR1 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CHMP1BQ7LBR1 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CHMP1BQ7LBR1 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CHMP1BQ7LBR1 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CHMP1BQ7LBR1 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC15.09■□□□□ 0.01
CHMP1BQ7LBR1 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CHMP1BQ7LBR1 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.09■□□□□ 0.01
CHMP1BQ7LBR1 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.09■□□□□ 0.01
CHMP1BQ7LBR1 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CHMP1BQ7LBR1 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CHMP1BQ7LBR1 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC15.09■□□□□ 0.01
CHMP1BQ7LBR1 AC140658.5-201ENST00000438532 169 ntBASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms