Protein–RNA interactions for Protein: Q6X4T0

C12orf54, Uncharacterized protein C12orf54, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf54Q6X4T0 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC13.24□□□□□ -0.29
C12orf54Q6X4T0 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
C12orf54Q6X4T0 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
C12orf54Q6X4T0 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
C12orf54Q6X4T0 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC13.24□□□□□ -0.29
C12orf54Q6X4T0 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
C12orf54Q6X4T0 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
C12orf54Q6X4T0 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC13.24□□□□□ -0.29
C12orf54Q6X4T0 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
C12orf54Q6X4T0 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
C12orf54Q6X4T0 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
C12orf54Q6X4T0 BANP-227ENST00000626016 2144 ntTSL 2 BASIC13.24□□□□□ -0.29
C12orf54Q6X4T0 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
C12orf54Q6X4T0 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
C12orf54Q6X4T0 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
C12orf54Q6X4T0 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
C12orf54Q6X4T0 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
C12orf54Q6X4T0 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC13.23□□□□□ -0.29
C12orf54Q6X4T0 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC13.23□□□□□ -0.29
C12orf54Q6X4T0 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC13.23□□□□□ -0.29
C12orf54Q6X4T0 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC13.23□□□□□ -0.29
C12orf54Q6X4T0 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
C12orf54Q6X4T0 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC13.23□□□□□ -0.29
C12orf54Q6X4T0 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
C12orf54Q6X4T0 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
C12orf54Q6X4T0 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC13.23□□□□□ -0.29
C12orf54Q6X4T0 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC13.23□□□□□ -0.29
C12orf54Q6X4T0 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC13.23□□□□□ -0.29
C12orf54Q6X4T0 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
C12orf54Q6X4T0 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC13.23□□□□□ -0.29
C12orf54Q6X4T0 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
C12orf54Q6X4T0 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC13.23□□□□□ -0.29
C12orf54Q6X4T0 CD81-202ENST00000381036 880 ntTSL 3 BASIC13.23□□□□□ -0.29
C12orf54Q6X4T0 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC13.23□□□□□ -0.29
C12orf54Q6X4T0 TSSK5P-201ENST00000423978 907 ntBASIC13.23□□□□□ -0.29
C12orf54Q6X4T0 INE1-201ENST00000456273 945 ntBASIC13.23□□□□□ -0.29
C12orf54Q6X4T0 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
C12orf54Q6X4T0 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC13.23□□□□□ -0.29
C12orf54Q6X4T0 AC092658.1-201ENST00000505836 891 ntBASIC13.23□□□□□ -0.29
C12orf54Q6X4T0 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC13.23□□□□□ -0.29
C12orf54Q6X4T0 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC13.23□□□□□ -0.29
C12orf54Q6X4T0 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC13.23□□□□□ -0.29
C12orf54Q6X4T0 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC13.23□□□□□ -0.29
C12orf54Q6X4T0 AL162274.1-201ENST00000617191 1098 ntBASIC13.23□□□□□ -0.29
C12orf54Q6X4T0 GPER1-207ENST00000619052 571 ntTSL 2 BASIC13.23□□□□□ -0.29
C12orf54Q6X4T0 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
C12orf54Q6X4T0 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC13.23□□□□□ -0.29
C12orf54Q6X4T0 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC13.23□□□□□ -0.29
C12orf54Q6X4T0 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
C12orf54Q6X4T0 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
C12orf54Q6X4T0 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
C12orf54Q6X4T0 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
C12orf54Q6X4T0 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC13.23□□□□□ -0.29
C12orf54Q6X4T0 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
C12orf54Q6X4T0 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
C12orf54Q6X4T0 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
C12orf54Q6X4T0 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
C12orf54Q6X4T0 AC138028.4-201ENST00000564984 1845 ntBASIC13.23□□□□□ -0.29
C12orf54Q6X4T0 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
C12orf54Q6X4T0 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
C12orf54Q6X4T0 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
C12orf54Q6X4T0 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
C12orf54Q6X4T0 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC13.22□□□□□ -0.29
C12orf54Q6X4T0 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC13.22□□□□□ -0.29
C12orf54Q6X4T0 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC13.22□□□□□ -0.29
C12orf54Q6X4T0 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
C12orf54Q6X4T0 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
C12orf54Q6X4T0 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
C12orf54Q6X4T0 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
C12orf54Q6X4T0 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC13.22□□□□□ -0.29
C12orf54Q6X4T0 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
C12orf54Q6X4T0 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
C12orf54Q6X4T0 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
C12orf54Q6X4T0 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
C12orf54Q6X4T0 AL512384.1-201ENST00000406683 331 ntBASIC13.22□□□□□ -0.29
C12orf54Q6X4T0 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
C12orf54Q6X4T0 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
C12orf54Q6X4T0 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC13.22□□□□□ -0.29
C12orf54Q6X4T0 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC13.22□□□□□ -0.29
C12orf54Q6X4T0 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC13.22□□□□□ -0.29
C12orf54Q6X4T0 AC107918.2-201ENST00000530817 355 ntBASIC13.22□□□□□ -0.29
C12orf54Q6X4T0 AC109635.5-201ENST00000533593 962 ntBASIC13.22□□□□□ -0.29
C12orf54Q6X4T0 MMP17-203ENST00000535004 719 ntTSL 3 BASIC13.22□□□□□ -0.29
C12orf54Q6X4T0 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
C12orf54Q6X4T0 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
C12orf54Q6X4T0 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC13.22□□□□□ -0.29
C12orf54Q6X4T0 MPI-209ENST00000564003 1195 ntTSL 2 BASIC13.22□□□□□ -0.29
C12orf54Q6X4T0 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC13.22□□□□□ -0.29
C12orf54Q6X4T0 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC13.22□□□□□ -0.29
C12orf54Q6X4T0 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC13.22□□□□□ -0.29
C12orf54Q6X4T0 AC018529.1-201ENST00000613063 361 ntBASIC13.22□□□□□ -0.29
C12orf54Q6X4T0 SPDYE12P-201ENST00000618416 771 ntBASIC13.22□□□□□ -0.29
C12orf54Q6X4T0 AC007326.2-201ENST00000624224 7579 ntBASIC13.22□□□□□ -0.29
C12orf54Q6X4T0 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
C12orf54Q6X4T0 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
C12orf54Q6X4T0 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC13.22□□□□□ -0.29
C12orf54Q6X4T0 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
C12orf54Q6X4T0 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC13.22□□□□□ -0.29
C12orf54Q6X4T0 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
C12orf54Q6X4T0 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms