Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC17.3■□□□□ 0.36
CNKSR3Q6P9H4 PFN1P12-201ENST00000455938 534 ntBASIC17.3■□□□□ 0.36
CNKSR3Q6P9H4 AC108725.1-201ENST00000495472 409 ntBASIC17.3■□□□□ 0.36
CNKSR3Q6P9H4 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CNKSR3Q6P9H4 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC17.3■□□□□ 0.36
CNKSR3Q6P9H4 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC17.3■□□□□ 0.36
CNKSR3Q6P9H4 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CNKSR3Q6P9H4 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC17.3■□□□□ 0.36
CNKSR3Q6P9H4 AC120045.2-201ENST00000567334 178 ntBASIC17.3■□□□□ 0.36
CNKSR3Q6P9H4 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CNKSR3Q6P9H4 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC17.3■□□□□ 0.36
CNKSR3Q6P9H4 AC103810.3-201ENST00000583567 96 ntBASIC17.3■□□□□ 0.36
CNKSR3Q6P9H4 AL049840.4-201ENST00000602422 811 ntBASIC17.3■□□□□ 0.36
CNKSR3Q6P9H4 AC244093.1-201ENST00000610837 814 ntBASIC17.3■□□□□ 0.36
CNKSR3Q6P9H4 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC17.3■□□□□ 0.36
CNKSR3Q6P9H4 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CNKSR3Q6P9H4 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNKSR3Q6P9H4 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNKSR3Q6P9H4 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CNKSR3Q6P9H4 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.3■□□□□ 0.36
CNKSR3Q6P9H4 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CNKSR3Q6P9H4 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNKSR3Q6P9H4 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNKSR3Q6P9H4 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC17.3■□□□□ 0.36
CNKSR3Q6P9H4 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNKSR3Q6P9H4 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CNKSR3Q6P9H4 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
CNKSR3Q6P9H4 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.29■□□□□ 0.36
CNKSR3Q6P9H4 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.29■□□□□ 0.36
CNKSR3Q6P9H4 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CNKSR3Q6P9H4 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNKSR3Q6P9H4 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CNKSR3Q6P9H4 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CNKSR3Q6P9H4 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CNKSR3Q6P9H4 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNKSR3Q6P9H4 C1QBPP1-201ENST00000400117 770 ntBASIC17.29■□□□□ 0.36
CNKSR3Q6P9H4 BAATP1-201ENST00000412284 1225 ntBASIC17.29■□□□□ 0.36
CNKSR3Q6P9H4 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CNKSR3Q6P9H4 USP40-206ENST00000443711 628 ntTSL 2 BASIC17.29■□□□□ 0.36
CNKSR3Q6P9H4 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
CNKSR3Q6P9H4 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CNKSR3Q6P9H4 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNKSR3Q6P9H4 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC17.29■□□□□ 0.36
CNKSR3Q6P9H4 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC17.29■□□□□ 0.36
CNKSR3Q6P9H4 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC17.29■□□□□ 0.36
CNKSR3Q6P9H4 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC17.29■□□□□ 0.36
CNKSR3Q6P9H4 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC17.29■□□□□ 0.36
CNKSR3Q6P9H4 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC17.29■□□□□ 0.36
CNKSR3Q6P9H4 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC17.29■□□□□ 0.36
CNKSR3Q6P9H4 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CNKSR3Q6P9H4 AL592424.1-201ENST00000563624 1536 ntBASIC17.29■□□□□ 0.36
CNKSR3Q6P9H4 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNKSR3Q6P9H4 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNKSR3Q6P9H4 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNKSR3Q6P9H4 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNKSR3Q6P9H4 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNKSR3Q6P9H4 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CNKSR3Q6P9H4 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNKSR3Q6P9H4 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.28■□□□□ 0.36
CNKSR3Q6P9H4 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CNKSR3Q6P9H4 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNKSR3Q6P9H4 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNKSR3Q6P9H4 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CNKSR3Q6P9H4 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.28■□□□□ 0.36
CNKSR3Q6P9H4 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNKSR3Q6P9H4 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CNKSR3Q6P9H4 ZBTB12BP-201ENST00000314232 1122 ntBASIC17.28■□□□□ 0.36
CNKSR3Q6P9H4 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNKSR3Q6P9H4 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC17.28■□□□□ 0.36
CNKSR3Q6P9H4 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.28■□□□□ 0.36
CNKSR3Q6P9H4 HAUS4P1-201ENST00000406739 1145 ntBASIC17.28■□□□□ 0.36
CNKSR3Q6P9H4 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNKSR3Q6P9H4 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC17.28■□□□□ 0.36
CNKSR3Q6P9H4 YBX1P6-201ENST00000442962 1002 ntBASIC17.28■□□□□ 0.36
CNKSR3Q6P9H4 FTH1P14-201ENST00000482930 551 ntBASIC17.28■□□□□ 0.36
CNKSR3Q6P9H4 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC17.28■□□□□ 0.36
CNKSR3Q6P9H4 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNKSR3Q6P9H4 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC17.28■□□□□ 0.36
CNKSR3Q6P9H4 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC17.28■□□□□ 0.36
CNKSR3Q6P9H4 AC079316.1-201ENST00000548397 411 ntBASIC17.28■□□□□ 0.36
CNKSR3Q6P9H4 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CNKSR3Q6P9H4 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC17.28■□□□□ 0.36
CNKSR3Q6P9H4 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNKSR3Q6P9H4 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.28■□□□□ 0.36
CNKSR3Q6P9H4 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.28■□□□□ 0.36
CNKSR3Q6P9H4 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNKSR3Q6P9H4 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CNKSR3Q6P9H4 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CNKSR3Q6P9H4 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNKSR3Q6P9H4 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNKSR3Q6P9H4 LOX-206ENST00000639739 1626 ntTSL 5 BASIC17.28■□□□□ 0.36
CNKSR3Q6P9H4 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNKSR3Q6P9H4 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.28■□□□□ 0.36
CNKSR3Q6P9H4 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNKSR3Q6P9H4 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNKSR3Q6P9H4 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.28■□□□□ 0.36
CNKSR3Q6P9H4 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CNKSR3Q6P9H4 BNIP3P1-202ENST00000550043 1585 ntBASIC17.28■□□□□ 0.36
CNKSR3Q6P9H4 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.27■□□□□ 0.36
CNKSR3Q6P9H4 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms