Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC62Q6P9F0 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC18.23■□□□□ 0.51
CCDC62Q6P9F0 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
CCDC62Q6P9F0 AL391825.1-201ENST00000457671 1364 ntBASIC18.23■□□□□ 0.51
CCDC62Q6P9F0 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC62Q6P9F0 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC62Q6P9F0 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC18.23■□□□□ 0.51
CCDC62Q6P9F0 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC18.23■□□□□ 0.51
CCDC62Q6P9F0 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC18.23■□□□□ 0.51
CCDC62Q6P9F0 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC18.23■□□□□ 0.51
CCDC62Q6P9F0 ARL16-202ENST00000570561 768 ntTSL 2 BASIC18.23■□□□□ 0.51
CCDC62Q6P9F0 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC18.23■□□□□ 0.51
CCDC62Q6P9F0 SRD5A3P1-201ENST00000603021 949 ntBASIC18.23■□□□□ 0.51
CCDC62Q6P9F0 CHCHD2P3-201ENST00000603038 451 ntBASIC18.23■□□□□ 0.51
CCDC62Q6P9F0 AC004461.2-201ENST00000629517 803 ntBASIC18.23■□□□□ 0.51
CCDC62Q6P9F0 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC62Q6P9F0 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC62Q6P9F0 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.23■□□□□ 0.51
CCDC62Q6P9F0 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
CCDC62Q6P9F0 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
CCDC62Q6P9F0 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC62Q6P9F0 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC62Q6P9F0 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC18.22■□□□□ 0.51
CCDC62Q6P9F0 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC62Q6P9F0 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC62Q6P9F0 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC62Q6P9F0 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC62Q6P9F0 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC62Q6P9F0 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC62Q6P9F0 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC62Q6P9F0 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC18.22■□□□□ 0.51
CCDC62Q6P9F0 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC62Q6P9F0 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
CCDC62Q6P9F0 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC18.22■□□□□ 0.51
CCDC62Q6P9F0 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.22■□□□□ 0.51
CCDC62Q6P9F0 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC62Q6P9F0 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC62Q6P9F0 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC62Q6P9F0 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC18.22■□□□□ 0.51
CCDC62Q6P9F0 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC18.22■□□□□ 0.51
CCDC62Q6P9F0 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC18.22■□□□□ 0.51
CCDC62Q6P9F0 MEIS3P1-201ENST00000495167 958 ntBASIC18.22■□□□□ 0.51
CCDC62Q6P9F0 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC62Q6P9F0 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC18.22■□□□□ 0.51
CCDC62Q6P9F0 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC18.22■□□□□ 0.51
CCDC62Q6P9F0 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC62Q6P9F0 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC62Q6P9F0 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC62Q6P9F0 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC18.22■□□□□ 0.51
CCDC62Q6P9F0 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC18.22■□□□□ 0.51
CCDC62Q6P9F0 AL365330.1-201ENST00000607459 531 ntBASIC18.22■□□□□ 0.51
CCDC62Q6P9F0 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC18.22■□□□□ 0.51
CCDC62Q6P9F0 MIR6069-201ENST00000620069 79 ntBASIC18.22■□□□□ 0.51
CCDC62Q6P9F0 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC62Q6P9F0 AL136982.4-201ENST00000437689 1740 ntBASIC18.22■□□□□ 0.51
CCDC62Q6P9F0 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC62Q6P9F0 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC18.22■□□□□ 0.51
CCDC62Q6P9F0 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC62Q6P9F0 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC62Q6P9F0 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CCDC62Q6P9F0 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC18.22■□□□□ 0.51
CCDC62Q6P9F0 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC18.22■□□□□ 0.51
CCDC62Q6P9F0 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC62Q6P9F0 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC62Q6P9F0 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.22■□□□□ 0.51
CCDC62Q6P9F0 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC62Q6P9F0 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC18.22■□□□□ 0.51
CCDC62Q6P9F0 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
CCDC62Q6P9F0 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC62Q6P9F0 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
CCDC62Q6P9F0 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
CCDC62Q6P9F0 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
CCDC62Q6P9F0 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC62Q6P9F0 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC62Q6P9F0 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC18.22■□□□□ 0.51
CCDC62Q6P9F0 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CCDC62Q6P9F0 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC62Q6P9F0 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.21■□□□□ 0.51
CCDC62Q6P9F0 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC18.21■□□□□ 0.51
CCDC62Q6P9F0 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC62Q6P9F0 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC62Q6P9F0 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CCDC62Q6P9F0 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC62Q6P9F0 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC62Q6P9F0 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC62Q6P9F0 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC62Q6P9F0 DGCR5-201ENST00000399539 862 ntBASIC18.21■□□□□ 0.51
CCDC62Q6P9F0 HIST3H2BA-201ENST00000436555 524 ntBASIC18.21■□□□□ 0.51
CCDC62Q6P9F0 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC62Q6P9F0 AC093004.1-201ENST00000508850 424 ntBASIC18.21■□□□□ 0.51
CCDC62Q6P9F0 PAM16-215ENST00000577031 548 ntTSL 4 BASIC18.21■□□□□ 0.51
CCDC62Q6P9F0 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.51
CCDC62Q6P9F0 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC62Q6P9F0 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC18.21■□□□□ 0.51
CCDC62Q6P9F0 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC18.21■□□□□ 0.51
CCDC62Q6P9F0 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC18.21■□□□□ 0.51
CCDC62Q6P9F0 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC62Q6P9F0 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC62Q6P9F0 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC62Q6P9F0 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms