Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC19.45■□□□□ 0.7
RNF20Q5VTR2 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC19.45■□□□□ 0.7
RNF20Q5VTR2 RN7SL589P-201ENST00000481268 310 ntBASIC19.45■□□□□ 0.7
RNF20Q5VTR2 POLD2P1-201ENST00000511220 997 ntBASIC19.45■□□□□ 0.7
RNF20Q5VTR2 PGAM5P1-201ENST00000518923 814 ntBASIC19.45■□□□□ 0.7
RNF20Q5VTR2 IGHV3OR16-6-201ENST00000568775 360 ntBASIC19.45■□□□□ 0.7
RNF20Q5VTR2 AC073389.1-201ENST00000595595 795 ntBASIC19.45■□□□□ 0.7
RNF20Q5VTR2 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC19.45■□□□□ 0.7
RNF20Q5VTR2 AGK-211ENST00000629555 2765 ntTSL 5 BASIC19.45■□□□□ 0.7
RNF20Q5VTR2 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
RNF20Q5VTR2 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
RNF20Q5VTR2 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
RNF20Q5VTR2 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC19.45■□□□□ 0.7
RNF20Q5VTR2 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF20Q5VTR2 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RNF20Q5VTR2 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF20Q5VTR2 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF20Q5VTR2 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
RNF20Q5VTR2 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
RNF20Q5VTR2 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF20Q5VTR2 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF20Q5VTR2 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC19.44■□□□□ 0.7
RNF20Q5VTR2 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
RNF20Q5VTR2 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RNF20Q5VTR2 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC19.44■□□□□ 0.7
RNF20Q5VTR2 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
RNF20Q5VTR2 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC19.44■□□□□ 0.7
RNF20Q5VTR2 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RNF20Q5VTR2 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC19.44■□□□□ 0.7
RNF20Q5VTR2 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF20Q5VTR2 PMP22-202ENST00000395936 816 ntTSL 3 BASIC19.44■□□□□ 0.7
RNF20Q5VTR2 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC19.44■□□□□ 0.7
RNF20Q5VTR2 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC19.44■□□□□ 0.7
RNF20Q5VTR2 TFAMP1-201ENST00000412727 736 ntBASIC19.44■□□□□ 0.7
RNF20Q5VTR2 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF20Q5VTR2 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC19.44■□□□□ 0.7
RNF20Q5VTR2 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC19.44■□□□□ 0.7
RNF20Q5VTR2 AC105233.2-201ENST00000523697 349 ntBASIC19.44■□□□□ 0.7
RNF20Q5VTR2 AF228730.5-201ENST00000530288 346 ntBASIC19.44■□□□□ 0.7
RNF20Q5VTR2 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC19.44■□□□□ 0.7
RNF20Q5VTR2 AL135744.1-201ENST00000565098 629 ntBASIC19.44■□□□□ 0.7
RNF20Q5VTR2 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC19.44■□□□□ 0.7
RNF20Q5VTR2 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
RNF20Q5VTR2 AC092902.6-201ENST00000641783 218 ntBASIC19.44■□□□□ 0.7
RNF20Q5VTR2 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RNF20Q5VTR2 AC010491.1-201ENST00000563101 2797 ntBASIC19.44■□□□□ 0.7
RNF20Q5VTR2 AC069224.1-201ENST00000566372 1715 ntBASIC19.44■□□□□ 0.7
RNF20Q5VTR2 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
RNF20Q5VTR2 SUPT20HL2-201ENST00000486479 2409 ntBASIC19.44■□□□□ 0.7
RNF20Q5VTR2 AL513477.1-201ENST00000602865 2407 ntBASIC19.44■□□□□ 0.7
RNF20Q5VTR2 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RNF20Q5VTR2 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF20Q5VTR2 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF20Q5VTR2 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF20Q5VTR2 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RNF20Q5VTR2 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC19.43■□□□□ 0.7
RNF20Q5VTR2 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF20Q5VTR2 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC19.43■□□□□ 0.7
RNF20Q5VTR2 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
RNF20Q5VTR2 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF20Q5VTR2 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC19.43■□□□□ 0.7
RNF20Q5VTR2 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF20Q5VTR2 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF20Q5VTR2 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF20Q5VTR2 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF20Q5VTR2 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RNF20Q5VTR2 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
RNF20Q5VTR2 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF20Q5VTR2 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
RNF20Q5VTR2 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
RNF20Q5VTR2 HAUS4P1-201ENST00000406739 1145 ntBASIC19.43■□□□□ 0.7
RNF20Q5VTR2 ACTG1P14-201ENST00000446382 1122 ntBASIC19.43■□□□□ 0.7
RNF20Q5VTR2 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RNF20Q5VTR2 C20orf181-201ENST00000623918 480 ntBASIC19.43■□□□□ 0.7
RNF20Q5VTR2 AC007950.2-201ENST00000615045 2347 ntBASIC19.43■□□□□ 0.7
RNF20Q5VTR2 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF20Q5VTR2 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RNF20Q5VTR2 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC19.43■□□□□ 0.7
RNF20Q5VTR2 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC19.43■□□□□ 0.7
RNF20Q5VTR2 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF20Q5VTR2 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RNF20Q5VTR2 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF20Q5VTR2 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC19.43■□□□□ 0.7
RNF20Q5VTR2 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF20Q5VTR2 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RNF20Q5VTR2 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC19.42■□□□□ 0.7
RNF20Q5VTR2 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF20Q5VTR2 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
RNF20Q5VTR2 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF20Q5VTR2 YBX2P1-201ENST00000394192 760 ntBASIC19.42■□□□□ 0.7
RNF20Q5VTR2 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC19.42■□□□□ 0.7
RNF20Q5VTR2 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
RNF20Q5VTR2 AC098859.1-201ENST00000502915 1238 ntBASIC19.42■□□□□ 0.7
RNF20Q5VTR2 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC19.42■□□□□ 0.7
RNF20Q5VTR2 MIR4321-201ENST00000592276 80 ntBASIC19.42■□□□□ 0.7
RNF20Q5VTR2 MTDHP5-201ENST00000598980 586 ntBASIC19.42■□□□□ 0.7
RNF20Q5VTR2 CITED2-204ENST00000618718 901 ntTSL 2 BASIC19.42■□□□□ 0.7
RNF20Q5VTR2 AC008267.7-201ENST00000624570 1194 ntBASIC19.42■□□□□ 0.7
RNF20Q5VTR2 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF20Q5VTR2 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms