Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC13.88□□□□□ -0.19
LRRK2Q5S007 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LRRK2Q5S007 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC13.88□□□□□ -0.19
LRRK2Q5S007 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LRRK2Q5S007 KRT8P39-201ENST00000396270 1433 ntBASIC13.88□□□□□ -0.19
LRRK2Q5S007 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC13.88□□□□□ -0.19
LRRK2Q5S007 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LRRK2Q5S007 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LRRK2Q5S007 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LRRK2Q5S007 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC13.88□□□□□ -0.19
LRRK2Q5S007 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LRRK2Q5S007 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LRRK2Q5S007 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC13.88□□□□□ -0.19
LRRK2Q5S007 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
LRRK2Q5S007 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC13.88□□□□□ -0.19
LRRK2Q5S007 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC13.88□□□□□ -0.19
LRRK2Q5S007 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC13.88□□□□□ -0.19
LRRK2Q5S007 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC13.88□□□□□ -0.19
LRRK2Q5S007 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC13.88□□□□□ -0.19
LRRK2Q5S007 MIR3147-201ENST00000577811 66 ntBASIC13.88□□□□□ -0.19
LRRK2Q5S007 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC13.88□□□□□ -0.19
LRRK2Q5S007 RN7SL736P-201ENST00000613111 269 ntBASIC13.88□□□□□ -0.19
LRRK2Q5S007 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LRRK2Q5S007 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
LRRK2Q5S007 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC13.88□□□□□ -0.19
LRRK2Q5S007 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC13.88□□□□□ -0.19
LRRK2Q5S007 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC13.87□□□□□ -0.19
LRRK2Q5S007 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
LRRK2Q5S007 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
LRRK2Q5S007 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
LRRK2Q5S007 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LRRK2Q5S007 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LRRK2Q5S007 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LRRK2Q5S007 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC13.87□□□□□ -0.19
LRRK2Q5S007 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LRRK2Q5S007 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LRRK2Q5S007 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LRRK2Q5S007 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
LRRK2Q5S007 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LRRK2Q5S007 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
LRRK2Q5S007 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
LRRK2Q5S007 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LRRK2Q5S007 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LRRK2Q5S007 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LRRK2Q5S007 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC13.87□□□□□ -0.19
LRRK2Q5S007 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC13.87□□□□□ -0.19
LRRK2Q5S007 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC13.87□□□□□ -0.19
LRRK2Q5S007 AC148477.9-201ENST00000623974 539 ntBASIC13.87□□□□□ -0.19
LRRK2Q5S007 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
LRRK2Q5S007 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LRRK2Q5S007 AL031731.1-201ENST00000642131 2094 ntBASIC13.87□□□□□ -0.19
LRRK2Q5S007 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
LRRK2Q5S007 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
LRRK2Q5S007 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC13.87□□□□□ -0.19
LRRK2Q5S007 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
LRRK2Q5S007 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LRRK2Q5S007 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LRRK2Q5S007 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
LRRK2Q5S007 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
LRRK2Q5S007 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
LRRK2Q5S007 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LRRK2Q5S007 AC079178.1-201ENST00000420915 656 ntBASIC13.87□□□□□ -0.19
LRRK2Q5S007 DNAJB1P1-201ENST00000429417 1024 ntBASIC13.87□□□□□ -0.19
LRRK2Q5S007 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC13.87□□□□□ -0.19
LRRK2Q5S007 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC13.87□□□□□ -0.19
LRRK2Q5S007 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC13.87□□□□□ -0.19
LRRK2Q5S007 AC026410.3-201ENST00000514280 936 ntBASIC13.87□□□□□ -0.19
LRRK2Q5S007 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC13.87□□□□□ -0.19
LRRK2Q5S007 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC13.87□□□□□ -0.19
LRRK2Q5S007 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC13.87□□□□□ -0.19
LRRK2Q5S007 CSH2-206ENST00000560142 749 ntTSL 5 BASIC13.87□□□□□ -0.19
LRRK2Q5S007 AF254983.2-201ENST00000612331 135 ntBASIC13.87□□□□□ -0.19
LRRK2Q5S007 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LRRK2Q5S007 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LRRK2Q5S007 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
LRRK2Q5S007 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LRRK2Q5S007 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LRRK2Q5S007 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LRRK2Q5S007 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LRRK2Q5S007 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
LRRK2Q5S007 AC135050.7-201ENST00000624508 2218 ntBASIC13.86□□□□□ -0.19
LRRK2Q5S007 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
LRRK2Q5S007 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
LRRK2Q5S007 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC13.86□□□□□ -0.19
LRRK2Q5S007 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LRRK2Q5S007 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
LRRK2Q5S007 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LRRK2Q5S007 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LRRK2Q5S007 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC13.86□□□□□ -0.19
LRRK2Q5S007 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC13.86□□□□□ -0.19
LRRK2Q5S007 FAM197Y7-201ENST00000432892 766 ntBASIC13.86□□□□□ -0.19
LRRK2Q5S007 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LRRK2Q5S007 COX5BP1-201ENST00000507622 393 ntBASIC13.86□□□□□ -0.19
LRRK2Q5S007 WDR7-208ENST00000589935 544 ntTSL 4 BASIC13.86□□□□□ -0.19
LRRK2Q5S007 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC13.86□□□□□ -0.19
LRRK2Q5S007 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC13.86□□□□□ -0.19
LRRK2Q5S007 CDK7-214ENST00000626796 358 ntTSL 5 BASIC13.86□□□□□ -0.19
LRRK2Q5S007 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC13.86□□□□□ -0.19
LRRK2Q5S007 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LRRK2Q5S007 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms