Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
PRICKLE4Q2TBC4 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
PRICKLE4Q2TBC4 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.12■□□□□ 0.01
PRICKLE4Q2TBC4 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PRICKLE4Q2TBC4 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PRICKLE4Q2TBC4 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
PRICKLE4Q2TBC4 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.11■□□□□ 0.01
PRICKLE4Q2TBC4 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
PRICKLE4Q2TBC4 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
PRICKLE4Q2TBC4 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PRICKLE4Q2TBC4 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PRICKLE4Q2TBC4 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PRICKLE4Q2TBC4 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.11■□□□□ 0.01
PRICKLE4Q2TBC4 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.11■□□□□ 0.01
PRICKLE4Q2TBC4 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.11■□□□□ 0.01
PRICKLE4Q2TBC4 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.11■□□□□ 0.01
PRICKLE4Q2TBC4 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
PRICKLE4Q2TBC4 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PRICKLE4Q2TBC4 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PRICKLE4Q2TBC4 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PRICKLE4Q2TBC4 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
PRICKLE4Q2TBC4 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
PRICKLE4Q2TBC4 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
PRICKLE4Q2TBC4 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.11■□□□□ 0.01
PRICKLE4Q2TBC4 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC15.11■□□□□ 0.01
PRICKLE4Q2TBC4 SPDYE14P-201ENST00000442619 822 ntBASIC15.11■□□□□ 0.01
PRICKLE4Q2TBC4 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.11■□□□□ 0.01
PRICKLE4Q2TBC4 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC15.11■□□□□ 0.01
PRICKLE4Q2TBC4 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.11■□□□□ 0.01
PRICKLE4Q2TBC4 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC15.11■□□□□ 0.01
PRICKLE4Q2TBC4 MAX-210ENST00000555419 765 ntTSL 5 BASIC15.11■□□□□ 0.01
PRICKLE4Q2TBC4 AC026150.2-201ENST00000564693 1156 ntBASIC15.11■□□□□ 0.01
PRICKLE4Q2TBC4 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC15.11■□□□□ 0.01
PRICKLE4Q2TBC4 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PRICKLE4Q2TBC4 RAB34-224ENST00000636513 888 ntTSL 5 BASIC15.11■□□□□ 0.01
PRICKLE4Q2TBC4 AC079781.4-201ENST00000641908 219 ntBASIC15.11■□□□□ 0.01
PRICKLE4Q2TBC4 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PRICKLE4Q2TBC4 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PRICKLE4Q2TBC4 LINC02199-201ENST00000506655 2702 ntBASIC15.11■□□□□ 0.01
PRICKLE4Q2TBC4 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PRICKLE4Q2TBC4 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PRICKLE4Q2TBC4 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PRICKLE4Q2TBC4 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PRICKLE4Q2TBC4 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PRICKLE4Q2TBC4 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PRICKLE4Q2TBC4 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PRICKLE4Q2TBC4 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.1■□□□□ 0.01
PRICKLE4Q2TBC4 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PRICKLE4Q2TBC4 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
PRICKLE4Q2TBC4 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PRICKLE4Q2TBC4 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
PRICKLE4Q2TBC4 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC15.1■□□□□ 0.01
PRICKLE4Q2TBC4 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
PRICKLE4Q2TBC4 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.1■□□□□ 0.01
PRICKLE4Q2TBC4 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PRICKLE4Q2TBC4 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PRICKLE4Q2TBC4 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PRICKLE4Q2TBC4 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PRICKLE4Q2TBC4 RPL30-202ENST00000396070 440 ntTSL 2 BASIC15.1■□□□□ 0.01
PRICKLE4Q2TBC4 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PRICKLE4Q2TBC4 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
PRICKLE4Q2TBC4 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC15.1■□□□□ 0.01
PRICKLE4Q2TBC4 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15.1■□□□□ 0.01
PRICKLE4Q2TBC4 AC139530.3-201ENST00000620344 690 ntBASIC15.1■□□□□ 0.01
PRICKLE4Q2TBC4 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PRICKLE4Q2TBC4 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.1■□□□□ 0.01
PRICKLE4Q2TBC4 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
PRICKLE4Q2TBC4 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
PRICKLE4Q2TBC4 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
PRICKLE4Q2TBC4 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PRICKLE4Q2TBC4 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.1■□□□□ 0.01
PRICKLE4Q2TBC4 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PRICKLE4Q2TBC4 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PRICKLE4Q2TBC4 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PRICKLE4Q2TBC4 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
PRICKLE4Q2TBC4 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
PRICKLE4Q2TBC4 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.1■□□□□ 0.01
PRICKLE4Q2TBC4 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PRICKLE4Q2TBC4 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PRICKLE4Q2TBC4 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PRICKLE4Q2TBC4 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.09■□□□□ 0.01
PRICKLE4Q2TBC4 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
PRICKLE4Q2TBC4 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
PRICKLE4Q2TBC4 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PRICKLE4Q2TBC4 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PRICKLE4Q2TBC4 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PRICKLE4Q2TBC4 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.09■□□□□ 0.01
PRICKLE4Q2TBC4 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
PRICKLE4Q2TBC4 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PRICKLE4Q2TBC4 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
PRICKLE4Q2TBC4 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PRICKLE4Q2TBC4 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PRICKLE4Q2TBC4 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
PRICKLE4Q2TBC4 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.09■□□□□ 0.01
PRICKLE4Q2TBC4 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
PRICKLE4Q2TBC4 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC15.09■□□□□ 0.01
PRICKLE4Q2TBC4 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PRICKLE4Q2TBC4 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC15.09■□□□□ 0.01
PRICKLE4Q2TBC4 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.09■□□□□ 0.01
PRICKLE4Q2TBC4 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms