Protein–RNA interactions for Protein: Q0VAF6

SYCN, Syncollin, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCNQ0VAF6 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SYCNQ0VAF6 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC10.82□□□□□ -0.68
SYCNQ0VAF6 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SYCNQ0VAF6 IGHV3-22-201ENST00000520721 359 ntBASIC10.82□□□□□ -0.68
SYCNQ0VAF6 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SYCNQ0VAF6 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC10.82□□□□□ -0.68
SYCNQ0VAF6 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC10.82□□□□□ -0.68
SYCNQ0VAF6 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC10.82□□□□□ -0.68
SYCNQ0VAF6 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
SYCNQ0VAF6 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC10.82□□□□□ -0.68
SYCNQ0VAF6 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SYCNQ0VAF6 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC10.82□□□□□ -0.68
SYCNQ0VAF6 SLC25A6P4-201ENST00000586535 553 ntBASIC10.82□□□□□ -0.68
SYCNQ0VAF6 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC10.82□□□□□ -0.68
SYCNQ0VAF6 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC10.82□□□□□ -0.68
SYCNQ0VAF6 AC023141.13-201ENST00000604991 943 ntBASIC10.82□□□□□ -0.68
SYCNQ0VAF6 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC10.82□□□□□ -0.68
SYCNQ0VAF6 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC10.82□□□□□ -0.68
SYCNQ0VAF6 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SYCNQ0VAF6 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SYCNQ0VAF6 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC10.82□□□□□ -0.68
SYCNQ0VAF6 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SYCNQ0VAF6 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
SYCNQ0VAF6 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SYCNQ0VAF6 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC10.82□□□□□ -0.68
SYCNQ0VAF6 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SYCNQ0VAF6 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SYCNQ0VAF6 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SYCNQ0VAF6 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SYCNQ0VAF6 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SYCNQ0VAF6 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC10.82□□□□□ -0.68
SYCNQ0VAF6 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SYCNQ0VAF6 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
SYCNQ0VAF6 AC008741.2-201ENST00000612792 3115 ntBASIC10.82□□□□□ -0.68
SYCNQ0VAF6 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SYCNQ0VAF6 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC10.82□□□□□ -0.68
SYCNQ0VAF6 SP100-205ENST00000409824 1802 ntTSL 5 BASIC10.81□□□□□ -0.68
SYCNQ0VAF6 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
SYCNQ0VAF6 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
SYCNQ0VAF6 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SYCNQ0VAF6 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
SYCNQ0VAF6 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SYCNQ0VAF6 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SYCNQ0VAF6 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC10.81□□□□□ -0.68
SYCNQ0VAF6 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
SYCNQ0VAF6 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
SYCNQ0VAF6 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SYCNQ0VAF6 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
SYCNQ0VAF6 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SYCNQ0VAF6 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SYCNQ0VAF6 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SYCNQ0VAF6 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
SYCNQ0VAF6 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
SYCNQ0VAF6 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SYCNQ0VAF6 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
SYCNQ0VAF6 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
SYCNQ0VAF6 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
SYCNQ0VAF6 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
SYCNQ0VAF6 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
SYCNQ0VAF6 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SYCNQ0VAF6 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
SYCNQ0VAF6 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC10.81□□□□□ -0.68
SYCNQ0VAF6 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
SYCNQ0VAF6 HCG4B-203ENST00000450128 991 ntBASIC10.81□□□□□ -0.68
SYCNQ0VAF6 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC10.81□□□□□ -0.68
SYCNQ0VAF6 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC10.81□□□□□ -0.68
SYCNQ0VAF6 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC10.81□□□□□ -0.68
SYCNQ0VAF6 CD63-204ENST00000546939 779 ntTSL 3 BASIC10.81□□□□□ -0.68
SYCNQ0VAF6 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC10.81□□□□□ -0.68
SYCNQ0VAF6 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
SYCNQ0VAF6 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC10.81□□□□□ -0.68
SYCNQ0VAF6 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SYCNQ0VAF6 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC10.81□□□□□ -0.68
SYCNQ0VAF6 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
SYCNQ0VAF6 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
SYCNQ0VAF6 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
SYCNQ0VAF6 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
SYCNQ0VAF6 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SYCNQ0VAF6 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
SYCNQ0VAF6 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SYCNQ0VAF6 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SYCNQ0VAF6 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
SYCNQ0VAF6 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SYCNQ0VAF6 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SYCNQ0VAF6 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
SYCNQ0VAF6 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC10.81□□□□□ -0.68
SYCNQ0VAF6 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SYCNQ0VAF6 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
SYCNQ0VAF6 HLA-A-201ENST00000376802 1334 ntBASIC10.81□□□□□ -0.68
SYCNQ0VAF6 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SYCNQ0VAF6 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
SYCNQ0VAF6 AC005622.1-201ENST00000636801 1703 ntBASIC10.81□□□□□ -0.68
SYCNQ0VAF6 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
SYCNQ0VAF6 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC10.81□□□□□ -0.68
SYCNQ0VAF6 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
SYCNQ0VAF6 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
SYCNQ0VAF6 REXO1L8P-201ENST00000604378 1897 ntBASIC10.81□□□□□ -0.68
SYCNQ0VAF6 U82695.1-201ENST00000635752 1889 ntBASIC10.81□□□□□ -0.68
SYCNQ0VAF6 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
SYCNQ0VAF6 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms