Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 HCG4-201ENST00000418983 998 ntBASIC18.32■□□□□ 0.52
TPM4P67936 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.32■□□□□ 0.52
TPM4P67936 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.32■□□□□ 0.52
TPM4P67936 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC18.32■□□□□ 0.52
TPM4P67936 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.32■□□□□ 0.52
TPM4P67936 KRT16P4-201ENST00000453883 522 ntBASIC18.32■□□□□ 0.52
TPM4P67936 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TPM4P67936 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.32■□□□□ 0.52
TPM4P67936 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC18.32■□□□□ 0.52
TPM4P67936 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TPM4P67936 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.32■□□□□ 0.52
TPM4P67936 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.32■□□□□ 0.52
TPM4P67936 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
TPM4P67936 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
TPM4P67936 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
TPM4P67936 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TPM4P67936 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TPM4P67936 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC18.32■□□□□ 0.52
TPM4P67936 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TPM4P67936 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC18.32■□□□□ 0.52
TPM4P67936 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TPM4P67936 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TPM4P67936 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TPM4P67936 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC18.32■□□□□ 0.52
TPM4P67936 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TPM4P67936 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TPM4P67936 SLC22A20-204ENST00000530038 1673 ntBASIC18.31■□□□□ 0.52
TPM4P67936 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
TPM4P67936 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TPM4P67936 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC18.31■□□□□ 0.52
TPM4P67936 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
TPM4P67936 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TPM4P67936 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TPM4P67936 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
TPM4P67936 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
TPM4P67936 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TPM4P67936 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.31■□□□□ 0.52
TPM4P67936 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TPM4P67936 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC18.31■□□□□ 0.52
TPM4P67936 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
TPM4P67936 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TPM4P67936 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TPM4P67936 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TPM4P67936 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TPM4P67936 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
TPM4P67936 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TPM4P67936 AC132008.2-207ENST00000454517 770 ntBASIC18.31■□□□□ 0.52
TPM4P67936 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.31■□□□□ 0.52
TPM4P67936 AC005412.3-201ENST00000580309 715 ntBASIC18.31■□□□□ 0.52
TPM4P67936 NKAPP1-205ENST00000585790 367 ntBASIC18.31■□□□□ 0.52
TPM4P67936 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TPM4P67936 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TPM4P67936 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
TPM4P67936 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.31■□□□□ 0.52
TPM4P67936 PGM5P2-202ENST00000637225 1043 ntBASIC18.31■□□□□ 0.52
TPM4P67936 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC18.31■□□□□ 0.52
TPM4P67936 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TPM4P67936 AL592424.1-201ENST00000563624 1536 ntBASIC18.31■□□□□ 0.52
TPM4P67936 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
TPM4P67936 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
TPM4P67936 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC18.31■□□□□ 0.52
TPM4P67936 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TPM4P67936 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TPM4P67936 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TPM4P67936 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC18.31■□□□□ 0.52
TPM4P67936 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TPM4P67936 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC18.31■□□□□ 0.52
TPM4P67936 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC18.31■□□□□ 0.52
TPM4P67936 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TPM4P67936 WARS-232ENST00000556645 2508 ntTSL 5 BASIC18.3■□□□□ 0.52
TPM4P67936 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.3■□□□□ 0.52
TPM4P67936 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.3■□□□□ 0.52
TPM4P67936 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TPM4P67936 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC18.3■□□□□ 0.52
TPM4P67936 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
TPM4P67936 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
TPM4P67936 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
TPM4P67936 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC18.3■□□□□ 0.52
TPM4P67936 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TPM4P67936 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
TPM4P67936 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.3■□□□□ 0.52
TPM4P67936 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TPM4P67936 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TPM4P67936 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
TPM4P67936 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
TPM4P67936 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.3■□□□□ 0.52
TPM4P67936 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC18.3■□□□□ 0.52
TPM4P67936 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.3■□□□□ 0.52
TPM4P67936 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC18.3■□□□□ 0.52
TPM4P67936 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.3■□□□□ 0.52
TPM4P67936 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.3■□□□□ 0.52
TPM4P67936 BSG-214ENST00000614867 960 ntTSL 3 BASIC18.3■□□□□ 0.52
TPM4P67936 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TPM4P67936 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC18.3■□□□□ 0.52
TPM4P67936 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC18.3■□□□□ 0.52
TPM4P67936 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
TPM4P67936 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TPM4P67936 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.3■□□□□ 0.52
TPM4P67936 IER3-202ENST00000376377 1350 ntBASIC18.3■□□□□ 0.52
TPM4P67936 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms