Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP46P62068 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP46P62068 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.12■□□□□ 0.33
USP46P62068 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.12■□□□□ 0.33
USP46P62068 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
USP46P62068 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP46P62068 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP46P62068 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.12■□□□□ 0.33
USP46P62068 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
USP46P62068 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP46P62068 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP46P62068 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP46P62068 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC17.12■□□□□ 0.33
USP46P62068 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP46P62068 TSSK5P-201ENST00000423978 907 ntBASIC17.12■□□□□ 0.33
USP46P62068 MTND6P24-201ENST00000440466 518 ntBASIC17.12■□□□□ 0.33
USP46P62068 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP46P62068 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
USP46P62068 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP46P62068 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC17.12■□□□□ 0.33
USP46P62068 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
USP46P62068 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC17.12■□□□□ 0.33
USP46P62068 LITAF-210ENST00000571976 548 ntTSL 2 BASIC17.12■□□□□ 0.33
USP46P62068 LITAF-214ENST00000574703 486 ntTSL 2 BASIC17.12■□□□□ 0.33
USP46P62068 MIR4745-201ENST00000577608 62 ntBASIC17.12■□□□□ 0.33
USP46P62068 AL133215.2-201ENST00000609242 977 ntBASIC17.12■□□□□ 0.33
USP46P62068 GPER1-207ENST00000619052 571 ntTSL 2 BASIC17.12■□□□□ 0.33
USP46P62068 AL590560.3-201ENST00000623350 461 ntBASIC17.12■□□□□ 0.33
USP46P62068 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
USP46P62068 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.12■□□□□ 0.33
USP46P62068 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP46P62068 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.12■□□□□ 0.33
USP46P62068 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP46P62068 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP46P62068 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
USP46P62068 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.12■□□□□ 0.33
USP46P62068 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.12■□□□□ 0.33
USP46P62068 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
USP46P62068 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP46P62068 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
USP46P62068 AL136379.1-201ENST00000623471 2642 ntBASIC17.12■□□□□ 0.33
USP46P62068 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
USP46P62068 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP46P62068 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.12■□□□□ 0.33
USP46P62068 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.12■□□□□ 0.33
USP46P62068 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.12■□□□□ 0.33
USP46P62068 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.11■□□□□ 0.33
USP46P62068 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.11■□□□□ 0.33
USP46P62068 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.11■□□□□ 0.33
USP46P62068 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.11■□□□□ 0.33
USP46P62068 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP46P62068 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
USP46P62068 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
USP46P62068 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC17.11■□□□□ 0.33
USP46P62068 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
USP46P62068 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.11■□□□□ 0.33
USP46P62068 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC17.11■□□□□ 0.33
USP46P62068 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP46P62068 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
USP46P62068 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.11■□□□□ 0.33
USP46P62068 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.11■□□□□ 0.33
USP46P62068 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP46P62068 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP46P62068 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.11■□□□□ 0.33
USP46P62068 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.11■□□□□ 0.33
USP46P62068 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
USP46P62068 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
USP46P62068 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP46P62068 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP46P62068 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP46P62068 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
USP46P62068 RAC2-204ENST00000406508 893 ntTSL 5 BASIC17.11■□□□□ 0.33
USP46P62068 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC17.11■□□□□ 0.33
USP46P62068 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP46P62068 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
USP46P62068 AC004890.2-204ENST00000481968 304 ntBASIC17.11■□□□□ 0.33
USP46P62068 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
USP46P62068 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC17.11■□□□□ 0.33
USP46P62068 TNFRSF10A-AS1-201ENST00000518308 637 ntTSL 3 BASIC17.11■□□□□ 0.33
USP46P62068 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC17.11■□□□□ 0.33
USP46P62068 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC17.11■□□□□ 0.33
USP46P62068 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC17.11■□□□□ 0.33
USP46P62068 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
USP46P62068 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC17.11■□□□□ 0.33
USP46P62068 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.11■□□□□ 0.33
USP46P62068 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.11■□□□□ 0.33
USP46P62068 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC17.11■□□□□ 0.33
USP46P62068 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
USP46P62068 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.11■□□□□ 0.33
USP46P62068 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP46P62068 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.11■□□□□ 0.33
USP46P62068 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
USP46P62068 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
USP46P62068 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
USP46P62068 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP46P62068 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
USP46P62068 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.11■□□□□ 0.33
USP46P62068 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
USP46P62068 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP46P62068 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms