Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
ACTBP60709 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.06□□□□□ -0.16
ACTBP60709 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
ACTBP60709 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.06□□□□□ -0.16
ACTBP60709 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
ACTBP60709 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ACTBP60709 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
ACTBP60709 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
ACTBP60709 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
ACTBP60709 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.06□□□□□ -0.16
ACTBP60709 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.06□□□□□ -0.16
ACTBP60709 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
ACTBP60709 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.06□□□□□ -0.16
ACTBP60709 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
ACTBP60709 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
ACTBP60709 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ACTBP60709 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ACTBP60709 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
ACTBP60709 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
ACTBP60709 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.05□□□□□ -0.16
ACTBP60709 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ACTBP60709 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.05□□□□□ -0.16
ACTBP60709 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.05□□□□□ -0.16
ACTBP60709 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ACTBP60709 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ACTBP60709 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ACTBP60709 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.05□□□□□ -0.16
ACTBP60709 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ACTBP60709 AC006486.2-201ENST00000624246 2199 ntBASIC14.05□□□□□ -0.16
ACTBP60709 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ACTBP60709 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.05□□□□□ -0.16
ACTBP60709 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ACTBP60709 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.05□□□□□ -0.16
ACTBP60709 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.05□□□□□ -0.16
ACTBP60709 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
ACTBP60709 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC14.05□□□□□ -0.16
ACTBP60709 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ACTBP60709 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ACTBP60709 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ACTBP60709 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC14.05□□□□□ -0.16
ACTBP60709 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC14.05□□□□□ -0.16
ACTBP60709 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
ACTBP60709 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC14.05□□□□□ -0.16
ACTBP60709 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC14.05□□□□□ -0.16
ACTBP60709 MIR3652-201ENST00000579335 131 ntBASIC14.05□□□□□ -0.16
ACTBP60709 AC138894.3-201ENST00000603787 634 ntBASIC14.05□□□□□ -0.16
ACTBP60709 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC14.05□□□□□ -0.16
ACTBP60709 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC14.05□□□□□ -0.16
ACTBP60709 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC14.05□□□□□ -0.16
ACTBP60709 CCNC-219ENST00000627680 896 ntTSL 5 BASIC14.05□□□□□ -0.16
ACTBP60709 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC14.05□□□□□ -0.16
ACTBP60709 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ACTBP60709 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ACTBP60709 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ACTBP60709 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
ACTBP60709 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
ACTBP60709 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
ACTBP60709 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.05□□□□□ -0.16
ACTBP60709 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
ACTBP60709 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ACTBP60709 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
ACTBP60709 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.05□□□□□ -0.16
ACTBP60709 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
ACTBP60709 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ACTBP60709 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ACTBP60709 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.05□□□□□ -0.16
ACTBP60709 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ACTBP60709 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.05□□□□□ -0.16
ACTBP60709 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ACTBP60709 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
ACTBP60709 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
ACTBP60709 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
ACTBP60709 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.04□□□□□ -0.16
ACTBP60709 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC14.04□□□□□ -0.16
ACTBP60709 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
ACTBP60709 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ACTBP60709 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ACTBP60709 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
ACTBP60709 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ACTBP60709 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ACTBP60709 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
ACTBP60709 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ACTBP60709 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
ACTBP60709 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC14.04□□□□□ -0.16
ACTBP60709 SPDYE21P-201ENST00000413323 827 ntBASIC14.04□□□□□ -0.16
ACTBP60709 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
ACTBP60709 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC14.04□□□□□ -0.16
ACTBP60709 NMU-205ENST00000511469 756 ntTSL 3 BASIC14.04□□□□□ -0.16
ACTBP60709 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC14.04□□□□□ -0.16
ACTBP60709 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ACTBP60709 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC14.04□□□□□ -0.16
ACTBP60709 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ACTBP60709 AC010654.1-201ENST00000615722 808 ntBASIC14.04□□□□□ -0.16
ACTBP60709 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ACTBP60709 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
ACTBP60709 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ACTBP60709 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
ACTBP60709 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ACTBP60709 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC14.04□□□□□ -0.16
ACTBP60709 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms