Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.96■□□□□ 0.15
CDH13P55290 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
CDH13P55290 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.96■□□□□ 0.15
CDH13P55290 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDH13P55290 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDH13P55290 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDH13P55290 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDH13P55290 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CDH13P55290 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.96■□□□□ 0.15
CDH13P55290 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDH13P55290 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDH13P55290 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDH13P55290 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CDH13P55290 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
CDH13P55290 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDH13P55290 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC15.96■□□□□ 0.15
CDH13P55290 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CDH13P55290 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.96■□□□□ 0.15
CDH13P55290 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.96■□□□□ 0.15
CDH13P55290 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC15.96■□□□□ 0.15
CDH13P55290 CRYGEP-201ENST00000412192 528 ntBASIC15.96■□□□□ 0.15
CDH13P55290 PMS2P4-201ENST00000412466 1052 ntBASIC15.96■□□□□ 0.15
CDH13P55290 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.96■□□□□ 0.15
CDH13P55290 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
CDH13P55290 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.96■□□□□ 0.15
CDH13P55290 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
CDH13P55290 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
CDH13P55290 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC15.96■□□□□ 0.15
CDH13P55290 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CDH13P55290 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.96■□□□□ 0.15
CDH13P55290 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.96■□□□□ 0.15
CDH13P55290 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CDH13P55290 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDH13P55290 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.96■□□□□ 0.15
CDH13P55290 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
CDH13P55290 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
CDH13P55290 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDH13P55290 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
CDH13P55290 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
CDH13P55290 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CDH13P55290 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
CDH13P55290 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
CDH13P55290 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CDH13P55290 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
CDH13P55290 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.95■□□□□ 0.14
CDH13P55290 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CDH13P55290 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CDH13P55290 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
CDH13P55290 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.95■□□□□ 0.14
CDH13P55290 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH13P55290 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH13P55290 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH13P55290 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH13P55290 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
CDH13P55290 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CDH13P55290 AC092919.2-201ENST00000623631 1645 ntBASIC15.95■□□□□ 0.14
CDH13P55290 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.95■□□□□ 0.14
CDH13P55290 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
CDH13P55290 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CDH13P55290 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH13P55290 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC15.95■□□□□ 0.14
CDH13P55290 AL450487.1-201ENST00000426799 995 ntBASIC15.95■□□□□ 0.14
CDH13P55290 FAAHP1-202ENST00000446499 1238 ntBASIC15.95■□□□□ 0.14
CDH13P55290 HCG4B-203ENST00000450128 991 ntBASIC15.95■□□□□ 0.14
CDH13P55290 RNA5SP415-201ENST00000517246 115 ntBASIC15.95■□□□□ 0.14
CDH13P55290 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.95■□□□□ 0.14
CDH13P55290 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC15.95■□□□□ 0.14
CDH13P55290 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CDH13P55290 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC15.95■□□□□ 0.14
CDH13P55290 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.95■□□□□ 0.14
CDH13P55290 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CDH13P55290 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC15.95■□□□□ 0.14
CDH13P55290 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH13P55290 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.95■□□□□ 0.14
CDH13P55290 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH13P55290 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH13P55290 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH13P55290 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH13P55290 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH13P55290 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.94■□□□□ 0.14
CDH13P55290 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
CDH13P55290 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.94■□□□□ 0.14
CDH13P55290 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDH13P55290 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDH13P55290 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.94■□□□□ 0.14
CDH13P55290 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CDH13P55290 AC073347.1-201ENST00000421633 2643 ntBASIC15.94■□□□□ 0.14
CDH13P55290 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDH13P55290 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDH13P55290 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CDH13P55290 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
CDH13P55290 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.94■□□□□ 0.14
CDH13P55290 RNA5SP419-201ENST00000515908 135 ntBASIC15.94■□□□□ 0.14
CDH13P55290 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.94■□□□□ 0.14
CDH13P55290 MIR3909-201ENST00000579518 119 ntBASIC15.94■□□□□ 0.14
CDH13P55290 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC15.94■□□□□ 0.14
CDH13P55290 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.94■□□□□ 0.14
CDH13P55290 AC010507.1-201ENST00000633895 436 ntBASIC15.94■□□□□ 0.14
CDH13P55290 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDH13P55290 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms