Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.52■□□□□ 0.08
NR1H2P55055 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC15.52■□□□□ 0.08
NR1H2P55055 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC15.52■□□□□ 0.08
NR1H2P55055 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
NR1H2P55055 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
NR1H2P55055 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.52■□□□□ 0.07
NR1H2P55055 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.52■□□□□ 0.07
NR1H2P55055 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
NR1H2P55055 INTS4P1-201ENST00000438455 1935 ntBASIC15.52■□□□□ 0.07
NR1H2P55055 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.52■□□□□ 0.07
NR1H2P55055 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NR1H2P55055 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
NR1H2P55055 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
NR1H2P55055 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
NR1H2P55055 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NR1H2P55055 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.52■□□□□ 0.07
NR1H2P55055 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
NR1H2P55055 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
NR1H2P55055 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NR1H2P55055 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.52■□□□□ 0.07
NR1H2P55055 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
NR1H2P55055 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NR1H2P55055 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.52■□□□□ 0.07
NR1H2P55055 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NR1H2P55055 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.52■□□□□ 0.07
NR1H2P55055 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC15.52■□□□□ 0.07
NR1H2P55055 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.51■□□□□ 0.07
NR1H2P55055 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NR1H2P55055 GGT4P-201ENST00000623672 1708 ntBASIC15.51■□□□□ 0.07
NR1H2P55055 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
NR1H2P55055 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
NR1H2P55055 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.51■□□□□ 0.07
NR1H2P55055 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NR1H2P55055 AC002310.6-201ENST00000624451 1377 ntBASIC15.51■□□□□ 0.07
NR1H2P55055 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NR1H2P55055 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NR1H2P55055 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NR1H2P55055 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NR1H2P55055 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NR1H2P55055 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
NR1H2P55055 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.51■□□□□ 0.07
NR1H2P55055 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.51■□□□□ 0.07
NR1H2P55055 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
NR1H2P55055 AC106881.1-201ENST00000605849 3329 ntBASIC15.51■□□□□ 0.07
NR1H2P55055 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NR1H2P55055 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NR1H2P55055 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC15.51■□□□□ 0.07
NR1H2P55055 AL031284.1-201ENST00000419297 478 ntBASIC15.51■□□□□ 0.07
NR1H2P55055 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NR1H2P55055 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC15.51■□□□□ 0.07
NR1H2P55055 AC112698.1-201ENST00000510299 916 ntBASIC15.51■□□□□ 0.07
NR1H2P55055 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC15.51■□□□□ 0.07
NR1H2P55055 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC15.51■□□□□ 0.07
NR1H2P55055 MTDHP3-201ENST00000594186 672 ntBASIC15.51■□□□□ 0.07
NR1H2P55055 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC15.51■□□□□ 0.07
NR1H2P55055 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NR1H2P55055 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
NR1H2P55055 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
NR1H2P55055 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NR1H2P55055 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NR1H2P55055 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.51■□□□□ 0.07
NR1H2P55055 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NR1H2P55055 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC15.51■□□□□ 0.07
NR1H2P55055 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NR1H2P55055 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NR1H2P55055 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
NR1H2P55055 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NR1H2P55055 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
NR1H2P55055 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.51■□□□□ 0.07
NR1H2P55055 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
NR1H2P55055 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
NR1H2P55055 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NR1H2P55055 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.5■□□□□ 0.07
NR1H2P55055 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.5■□□□□ 0.07
NR1H2P55055 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NR1H2P55055 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
NR1H2P55055 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NR1H2P55055 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NR1H2P55055 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
NR1H2P55055 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
NR1H2P55055 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NR1H2P55055 PRAL-201ENST00000624952 3286 ntBASIC15.5■□□□□ 0.07
NR1H2P55055 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
NR1H2P55055 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NR1H2P55055 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NR1H2P55055 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
NR1H2P55055 AC006449.6-201ENST00000612330 2296 ntBASIC15.5■□□□□ 0.07
NR1H2P55055 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
NR1H2P55055 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
NR1H2P55055 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NR1H2P55055 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.5■□□□□ 0.07
NR1H2P55055 CTNS-203ENST00000399306 803 ntTSL 3 BASIC15.5■□□□□ 0.07
NR1H2P55055 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC15.5■□□□□ 0.07
NR1H2P55055 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC15.5■□□□□ 0.07
NR1H2P55055 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.5■□□□□ 0.07
NR1H2P55055 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.5■□□□□ 0.07
NR1H2P55055 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC15.5■□□□□ 0.07
NR1H2P55055 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC15.5■□□□□ 0.07
NR1H2P55055 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
NR1H2P55055 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms