Protein–RNA interactions for Protein: P54829

PTPN5, Tyrosine-protein phosphatase non-receptor type 5, humanhuman

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5P54829 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.78■□□□□ 0.28
PTPN5P54829 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN5P54829 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN5P54829 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN5P54829 AL645728.1-201ENST00000366221 2101 ntBASIC16.78■□□□□ 0.28
PTPN5P54829 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN5P54829 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.78■□□□□ 0.28
PTPN5P54829 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.78■□□□□ 0.28
PTPN5P54829 AC006538.1-201ENST00000567905 1585 ntBASIC16.78■□□□□ 0.28
PTPN5P54829 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
PTPN5P54829 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN5P54829 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN5P54829 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC16.78■□□□□ 0.28
PTPN5P54829 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN5P54829 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN5P54829 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN5P54829 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.78■□□□□ 0.28
PTPN5P54829 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.78■□□□□ 0.28
PTPN5P54829 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN5P54829 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.78■□□□□ 0.28
PTPN5P54829 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC16.78■□□□□ 0.28
PTPN5P54829 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC16.78■□□□□ 0.28
PTPN5P54829 PFN1P12-201ENST00000455938 534 ntBASIC16.78■□□□□ 0.28
PTPN5P54829 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.78■□□□□ 0.28
PTPN5P54829 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.78■□□□□ 0.28
PTPN5P54829 RPS24-214ENST00000613865 538 ntTSL 5 BASIC16.78■□□□□ 0.28
PTPN5P54829 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN5P54829 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN5P54829 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN5P54829 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN5P54829 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN5P54829 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN5P54829 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN5P54829 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PTPN5P54829 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PTPN5P54829 AC022211.2-201ENST00000585075 2527 ntBASIC16.77■□□□□ 0.28
PTPN5P54829 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PTPN5P54829 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
PTPN5P54829 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
PTPN5P54829 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PTPN5P54829 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.77■□□□□ 0.28
PTPN5P54829 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.77■□□□□ 0.28
PTPN5P54829 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PTPN5P54829 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PTPN5P54829 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
PTPN5P54829 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PTPN5P54829 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PTPN5P54829 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PTPN5P54829 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
PTPN5P54829 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.77■□□□□ 0.28
PTPN5P54829 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PTPN5P54829 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PTPN5P54829 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PTPN5P54829 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
PTPN5P54829 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PTPN5P54829 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PTPN5P54829 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC16.77■□□□□ 0.28
PTPN5P54829 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC16.77■□□□□ 0.28
PTPN5P54829 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.77■□□□□ 0.28
PTPN5P54829 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PTPN5P54829 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.77■□□□□ 0.28
PTPN5P54829 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC16.77■□□□□ 0.28
PTPN5P54829 MIR3909-201ENST00000579518 119 ntBASIC16.77■□□□□ 0.28
PTPN5P54829 PIGL-212ENST00000581006 554 ntTSL 4 BASIC16.77■□□□□ 0.28
PTPN5P54829 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.77■□□□□ 0.28
PTPN5P54829 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.77■□□□□ 0.28
PTPN5P54829 AL031055.1-201ENST00000606362 631 ntBASIC16.77■□□□□ 0.28
PTPN5P54829 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC16.77■□□□□ 0.28
PTPN5P54829 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.77■□□□□ 0.28
PTPN5P54829 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PTPN5P54829 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PTPN5P54829 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
PTPN5P54829 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PTPN5P54829 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PTPN5P54829 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.77■□□□□ 0.27
PTPN5P54829 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.77■□□□□ 0.27
PTPN5P54829 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PTPN5P54829 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
PTPN5P54829 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN5P54829 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.76■□□□□ 0.27
PTPN5P54829 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC16.76■□□□□ 0.27
PTPN5P54829 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.76■□□□□ 0.27
PTPN5P54829 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN5P54829 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN5P54829 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN5P54829 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN5P54829 SLC22A20-204ENST00000530038 1673 ntBASIC16.76■□□□□ 0.27
PTPN5P54829 AC016027.1-202ENST00000607927 1699 ntBASIC16.76■□□□□ 0.27
PTPN5P54829 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN5P54829 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN5P54829 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN5P54829 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
PTPN5P54829 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
PTPN5P54829 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN5P54829 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN5P54829 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN5P54829 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN5P54829 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC16.76■□□□□ 0.27
PTPN5P54829 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN5P54829 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms